Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 RNU6-1114P-201ENST00000516022 107 ntBASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 SNORA70.18-201ENST00000516696 98 ntBASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 AC004792.1-201ENST00000614523 137 ntBASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 AC137590.2-201ENST00000619709 240 ntBASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SIT1Q9Y3P8 HSPA8P1-201ENST00000425843 1833 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 NEAT1-202ENST00000501122 22743 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 RNU6-222P-201ENST00000362438 107 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 RNU5B-2P-201ENST00000363036 113 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 SNORD113-8-201ENST00000363497 74 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 Y_RNA.274-201ENST00000364714 101 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 RNU6-290P-201ENST00000365212 101 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 RNU6-318P-201ENST00000384283 103 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 MIR1289-1-201ENST00000408836 144 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 RPS15AP7-201ENST00000439294 405 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC007969.2-201ENST00000441891 191 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 HMGB3P8-201ENST00000449709 577 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AL138752.1-201ENST00000452964 351 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 PRELID3BP1-201ENST00000457142 540 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AF186996.7-201ENST00000492781 209 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC023824.2-201ENST00000566185 400 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 MIR4325-201ENST00000583049 90 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 U2.14-201ENST00000615943 113 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC097372.5-201ENST00000623665 376 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AL353746.1-201ENST00000566293 6881 ntBASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SIT1Q9Y3P8 AC126323.6-202ENST00000568092 3511 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 LINC01355-201ENST00000566551 5444 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 RNU6-600P-201ENST00000362524 99 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 RNU4-90P-201ENST00000362773 141 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 Y_RNA.65-201ENST00000362846 100 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 Y_RNA.200-201ENST00000364018 102 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 Y_RNA.277-201ENST00000364754 102 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 Y_RNA.297-201ENST00000364950 91 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 RNU1-100P-201ENST00000365255 165 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 RNU6-142P-201ENST00000384019 107 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 MTHFD2P2-201ENST00000407725 247 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 MIR548M-201ENST00000408260 86 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 MIR1271-201ENST00000408537 86 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 AC087477.1-201ENST00000465747 340 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 SERF1AP1-201ENST00000514575 187 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 RNU6-406P-201ENST00000516470 107 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 MIR5571-201ENST00000577998 113 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 LARP7P3-201ENST00000579888 337 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 MIR3690-201ENST00000580266 75 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 SNORA43.4-201ENST00000629559 138 ntBASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIT1Q9Y3P8 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SIT1Q9Y3P8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 Y_RNA.269-201ENST00000364685 89 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 SNORA29-201ENST00000384183 140 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 RNU6-937P-201ENST00000384325 106 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 MIR32-201ENST00000384965 70 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 RPS4XP3-201ENST00000398541 413 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 AC074117.2-201ENST00000417130 397 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 AC011742.1-201ENST00000431448 434 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 AC104332.1-201ENST00000440471 797 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 AC096638.1-201ENST00000444678 216 ntBASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.65□□□□□ -1.83
SIT1Q9Y3P8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms