Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 RNU6-1001P-201ENST00000411265 100 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 WARS2P1-201ENST00000429678 537 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AC098831.1-201ENST00000440661 216 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AC124916.1-201ENST00000444020 547 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AC096638.1-201ENST00000444678 216 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 TMSB4XP3-201ENST00000445144 114 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 RPL23AP3-201ENST00000453844 468 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 RPL31P13-201ENST00000484151 370 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AC078817.1-201ENST00000492623 435 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 RNU1-95P-201ENST00000516357 160 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 RNU1-128P-201ENST00000516704 160 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AC090281.1-201ENST00000523019 276 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 MIR5695-201ENST00000579717 85 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AL078605.1-201ENST00000603529 500 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AL356489.2-201ENST00000566968 3528 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 AC008568.2-201ENST00000623862 2313 ntBASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP3Q9Y3E7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNU6-961P-201ENST00000363893 105 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 Y_RNA.275-201ENST00000364726 110 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 SNORD32A-201ENST00000364805 84 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNU1-140P-201ENST00000365040 165 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 SNORD113-1-201ENST00000365321 69 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 SNORA5A-201ENST00000384111 134 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 Y_RNA.446-201ENST00000384178 104 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNU6-541P-201ENST00000384709 110 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 MIR10B-201ENST00000385011 110 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RPL21P17-201ENST00000397467 475 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 AL035423.1-201ENST00000420331 213 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 AL133162.1-201ENST00000463228 453 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 COX6CP14-201ENST00000469580 174 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 MRPL42P6-201ENST00000486397 371 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RPS26P15-201ENST00000488067 348 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNA5SP208-201ENST00000516156 78 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNY3P16-201ENST00000516338 101 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNU1-103P-201ENST00000516502 125 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 RNU6-567P-201ENST00000516746 107 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 MTND5P41-201ENST00000517498 206 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 AC005296.1-201ENST00000616145 209 ntBASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.73□□□□□ -1.65
CHMP3Q9Y3E7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 SNORA25.1-201ENST00000362326 128 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 U8.10-201ENST00000384260 133 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 RNU2-61P-201ENST00000411069 191 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 MRPS10P1-201ENST00000448483 130 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 SNRPGP7-201ENST00000469016 106 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 RAC1P2-201ENST00000511164 579 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 Y_RNA.679-201ENST00000516416 91 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 RNU6-1073P-201ENST00000517182 106 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 RPL21P9-201ENST00000556149 474 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 LINC00933-203ENST00000559812 219 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 ZNF192P1-203ENST00000565888 810 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC072026.1-201ENST00000605023 201 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC037487.3-201ENST00000606668 112 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 IGHVIII-44-202ENST00000636235 289 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 AC018555.1-201ENST00000567548 1980 ntBASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.72□□□□□ -1.65
CHMP3Q9Y3E7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 SNORA71.3-201ENST00000362582 128 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RNU6-626P-201ENST00000363354 107 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 Y_RNA.383-201ENST00000383855 97 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RNU6-20P-201ENST00000384106 107 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RNU6-804P-201ENST00000384286 107 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 SNORD116-20-201ENST00000384529 92 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RNU5A-5P-201ENST00000411054 116 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 EIF1AXP1-201ENST00000419267 435 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 AC092047.1-201ENST00000424997 240 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 SNORA71B-202ENST00000439232 272 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 AL358232.1-201ENST00000448030 501 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RPL23AP14-201ENST00000468281 468 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RPS29P26-201ENST00000477483 171 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 AP001025.1-201ENST00000486139 332 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 AC091959.1-201ENST00000495857 238 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RNA5SP164-201ENST00000516533 110 ntBASIC4.71□□□□□ -1.66
CHMP3Q9Y3E7 RN7SKP49-201ENST00000516675 260 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms