Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MTND2P4-201ENST00000445034 1004 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AC010631.1-201ENST00000474150 156 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 RNU6-1092P-201ENST00000516955 87 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 ACA59.2-201ENST00000517061 156 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AL158211.4-201ENST00000606988 584 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AL365434.2-201ENST00000607979 234 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AL357075.2-201ENST00000614906 189 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AC009269.6-201ENST00000621778 588 ntBASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.28□□□□□ -2.37
SHANK2Q9UPX8 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 RNA5SP361-201ENST00000362686 118 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 SNORD18A-201ENST00000363753 72 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 RNA5SP493-201ENST00000364115 91 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 RNU6-1274P-201ENST00000384557 107 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 RNU6-296P-201ENST00000384608 107 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 Y_RNA.548-201ENST00000384656 105 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 Y_RNA.552-201ENST00000384665 112 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 MTCYBP43-201ENST00000513621 740 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC087897.1-201ENST00000550134 156 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC015688.6-201ENST00000577737 104 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 BPTFP1-201ENST00000579209 492 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC090578.1-201ENST00000604955 591 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC112220.2-201ENST00000605513 533 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC034229.4-201ENST00000607861 441 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 AC068647.2-201ENST00000637380 353 ntBASIC0.27□□□□□ -2.37
SHANK2Q9UPX8 SNORD114-19-201ENST00000363072 75 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 Y_RNA.99-201ENST00000363138 105 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 RNU6-1280P-201ENST00000365211 107 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 RNU6-48P-201ENST00000384161 107 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 MIR548B-201ENST00000385247 97 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AL929288.2-201ENST00000446368 407 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AC010460.2-201ENST00000509054 677 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 SNORA3.4-201ENST00000515969 96 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 Y_RNA.700-201ENST00000516806 100 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AP001893.2-201ENST00000526949 202 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 MIR3169-201ENST00000578032 83 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 MIR3664-201ENST00000579074 99 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AC009237.15-201ENST00000610252 501 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AC123767.1-202ENST00000620407 817 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 AC093648.1-201ENST00000623546 606 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 ZNF849P-201ENST00000594711 1566 ntBASIC0.26□□□□□ -2.37
SHANK2Q9UPX8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 RNU4-12P-201ENST00000365233 139 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 MIR200A-201ENST00000384875 90 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 RNU2-7P-201ENST00000410794 178 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 RPL21P111-201ENST00000418453 477 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AL589872.1-201ENST00000426602 288 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AL669831.1-202ENST00000428504 417 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 HSPE1P9-201ENST00000440046 311 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 RNA5SP269-201ENST00000459032 137 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC007834.2-201ENST00000536310 343 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC090502.2-201ENST00000549267 280 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 MIR5094-201ENST00000578766 85 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 BNIP3P24-201ENST00000593398 557 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC068790.6-201ENST00000602558 258 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AL133445.2-201ENST00000611191 527 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AL590240.4-201ENST00000616908 390 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC004009.2-201ENST00000623016 728 ntBASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.25□□□□□ -2.37
SHANK2Q9UPX8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 MTND2P5-201ENST00000432656 1006 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 RPEP5-201ENST00000441137 268 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 OR6C5P-201ENST00000452388 923 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 MTND3P4-201ENST00000453537 303 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 AC130509.1-201ENST00000464158 433 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 AC093259.1-201ENST00000509755 300 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 RNA5SP503-201ENST00000517047 117 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 AC012065.4-201ENST00000602445 679 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 AC010133.1-201ENST00000615809 842 ntBASIC0.24□□□□□ -2.37
SHANK2Q9UPX8 RNU6-944P-201ENST00000364023 107 ntBASIC0.23□□□□□ -2.37
SHANK2Q9UPX8 SNORD114-6-201ENST00000364393 72 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms