Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RPS15AP12-201ENST00000419498 388 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 RPS25P9-201ENST00000435591 252 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC006026.2-201ENST00000457376 180 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 MTND2P33-201ENST00000506452 1031 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 RNA5SP437-201ENST00000517249 129 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 LRRC6P1-201ENST00000532188 885 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 MTND5P35-201ENST00000557537 1720 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC091135.1-201ENST00000585943 307 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 NIFKP6-201ENST00000598115 845 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AP003465.2-201ENST00000602571 373 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AL022154.1-201ENST00000604698 785 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC090578.1-201ENST00000604955 591 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AL512427.1-201ENST00000618593 349 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 AC024940.5-201ENST00000622889 474 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 FRG1KP-201ENST00000623592 341 ntBASIC0.85□□□□□ -2.27
VPS29Q9UBQ0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 RNU6-462P-201ENST00000362659 105 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 RNU6-1222P-201ENST00000384615 107 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 PIGPP2-201ENST00000411569 458 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AL161935.2-201ENST00000414627 60 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 ELOCP17-201ENST00000414751 326 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 ELOCP9-201ENST00000418624 239 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 LARP1BP3-201ENST00000437229 869 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 FTH1P25-201ENST00000447665 469 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC119751.4-201ENST00000507498 357 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC091163.3-201ENST00000518269 1144 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 MIR4498-201ENST00000577599 66 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC024060.1-201ENST00000607052 494 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC012676.2-201ENST00000619258 186 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC009033.1-201ENST00000624279 431 ntBASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS29Q9UBQ0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.84□□□□□ -2.28
VPS29Q9UBQ0 AL391516.1-201ENST00000554380 2449 ntBASIC0.84□□□□□ -2.28
VPS29Q9UBQ0 SNORD56.1-201ENST00000362913 68 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 SNORA29-201ENST00000384183 140 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 RNU2-7P-201ENST00000410794 178 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AL117351.1-201ENST00000438864 766 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 BTBD7P2-201ENST00000441962 620 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC244505.5-201ENST00000443639 207 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC132479.1-201ENST00000449160 144 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 NDUFB1P2-201ENST00000449477 176 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 HMGN1P7-201ENST00000491722 313 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AL163195.1-201ENST00000496941 348 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 ARL2BPP4-201ENST00000506854 471 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC021146.8-201ENST00000507455 733 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 UBL5P1-201ENST00000507979 193 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC079395.1-201ENST00000510981 262 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC109445.1-201ENST00000512356 383 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 RNU6-237P-201ENST00000515985 71 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 Y_RNA.687-201ENST00000516558 91 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 RNU6-1092P-201ENST00000516955 87 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 SUMO2P18-201ENST00000518873 252 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC174048.1-201ENST00000603389 144 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AL138889.2-201ENST00000603883 242 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC069114.2-201ENST00000604699 304 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
VPS29Q9UBQ0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 BTF3L4P1-201ENST00000413813 468 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC134050.1-201ENST00000495088 933 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC005741.1-201ENST00000511094 432 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 TRMT112P2-201ENST00000512910 132 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 MIR449C-201ENST00000516047 92 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 SNORA43.2-201ENST00000516652 128 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 SNORA31.16-201ENST00000516773 139 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AL512310.8-201ENST00000550183 120 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AC009712.1-201ENST00000564938 316 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AP001004.1-201ENST00000582468 324 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AL590229.1-201ENST00000603497 542 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 AL136363.2-201ENST00000604173 851 ntBASIC0.82□□□□□ -2.28
VPS29Q9UBQ0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms