Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPL32P34-201ENST00000486380 400 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC104564.1-201ENST00000493028 407 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC097462.2-201ENST00000504623 481 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC023157.2-201ENST00000540596 141 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 MIR3609-201ENST00000582661 80 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC092628.2-201ENST00000622492 339 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC091903.1-201ENST00000624322 454 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 AC073073.2-201ENST00000609827 2578 ntBASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PPARGC1AQ9UBK2 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC110491.1-201ENST00000562191 2010 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 Y_RNA.307-201ENST00000365022 117 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 SNORD116-20-201ENST00000384529 92 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RPL21P75-201ENST00000396599 483 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 PTMAP2-201ENST00000397627 327 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RPL21P28-201ENST00000401418 483 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AL590556.1-201ENST00000423231 483 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 SDAD1P3-201ENST00000427380 333 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RPL21P39-201ENST00000463605 483 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC087190.1-201ENST00000484462 480 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC107032.1-201ENST00000485945 480 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC132942.1-201ENST00000486753 483 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC093591.1-201ENST00000491435 481 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RPL21P16-201ENST00000495531 483 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC006445.2-201ENST00000510061 472 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC067942.3-201ENST00000512025 362 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RNU6-897P-201ENST00000517135 105 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AC026403.1-201ENST00000518938 295 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AP002770.2-201ENST00000543613 532 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 AL451007.1-201ENST00000595491 289 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RPL23AP88-201ENST00000605759 454 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 RMST_6.1-201ENST00000611980 203 ntBASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PPARGC1AQ9UBK2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 SNORD9-201ENST00000362566 104 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-379P-201ENST00000363813 104 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-270P-201ENST00000364131 105 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-487P-201ENST00000365430 104 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-17P-201ENST00000384245 107 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-18P-201ENST00000384527 107 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC074117.2-201ENST00000417130 397 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC006989.1-201ENST00000427212 131 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 CYCSP4-201ENST00000429682 331 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 CYCSP32-201ENST00000440548 321 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC034236.1-201ENST00000469891 373 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC106707.2-201ENST00000484182 374 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA31.1-201ENST00000515993 133 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA31.5-201ENST00000516190 133 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC090617.3-201ENST00000573670 475 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC006557.5-201ENST00000603126 811 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC019159.1-201ENST00000605094 187 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 MIR3529-201ENST00000637713 78 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC009093.8-201ENST00000641769 292 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AL353743.1-202ENST00000431724 1695 ntBASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PPARGC1AQ9UBK2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 PWAR6-201ENST00000552334 4618 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.19-201ENST00000362462 99 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 SNORD32A-201ENST00000364805 84 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 SNORA73.2-201ENST00000364946 201 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 Y_RNA.350-201ENST00000365409 98 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 RNU6-142P-201ENST00000384019 107 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 U3.39-201ENST00000408569 239 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC099548.1-201ENST00000421443 426 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 BPY2DP-201ENST00000422208 265 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC139712.2-201ENST00000424302 339 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 BX679664.1-201ENST00000434429 253 ntBASIC3.7□□□□□ -1.82
PPARGC1AQ9UBK2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms