Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 Y_RNA.151-201ENST00000363566 112 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RNU6-1317P-201ENST00000364582 104 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RNU6-487P-201ENST00000365430 104 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 CD24P4-201ENST00000382840 243 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RNU6-843P-201ENST00000384454 104 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 MIR147B-201ENST00000390185 80 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 AL513475.1-201ENST00000406602 315 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RNU6-370P-201ENST00000411008 104 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RPS20P15-201ENST00000412792 311 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 UQCRHP3-201ENST00000451503 251 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 Y_RNA.632-201ENST00000459189 102 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 GZMAP1-201ENST00000503054 631 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 ACA59.1-201ENST00000515966 143 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 AC107016.2-201ENST00000547968 190 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.22□□□□□ -1.89
COL20A1Q9P218 FRG2DP-202ENST00000566967 323 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.22□□□□□ -1.89
COL20A1Q9P218 CPDP1-201ENST00000579660 283 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 AC019159.1-201ENST00000605094 187 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RNU6-91P-201ENST00000607774 107 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COL20A1Q9P218 AC110079.1-202ENST00000635213 138 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.22□□□□□ -1.89
COL20A1Q9P218 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL20A1Q9P218 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
COL20A1Q9P218 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
COL20A1Q9P218 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.21□□□□□ -1.9
COL20A1Q9P218 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 SNORD56.1-201ENST00000362913 68 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 RNU4-76P-201ENST00000364509 141 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 Y_RNA.460-201ENST00000384255 102 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
COL20A1Q9P218 MTCYBP4-201ENST00000401524 249 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 RNU2-52P-201ENST00000410680 190 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 NUP35P1-201ENST00000422734 947 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 AL358075.3-201ENST00000426289 226 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.21□□□□□ -1.9
COL20A1Q9P218 OSTCP8-201ENST00000445117 448 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 AL109933.2-201ENST00000452651 260 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 SNORD5.1-201ENST00000458800 75 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 RN7SL75P-201ENST00000461926 281 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.21□□□□□ -1.9
COL20A1Q9P218 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 RNU5B-3P-201ENST00000516601 115 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 RNU6-612P-201ENST00000516909 102 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 Y_RNA.708-201ENST00000516950 96 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 SNORA31.18-201ENST00000517043 134 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 GLYCAM1-201ENST00000546596 285 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.21□□□□□ -1.9
COL20A1Q9P218 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.21□□□□□ -1.9
COL20A1Q9P218 AC018462.2-201ENST00000605375 395 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 AC133104.2-201ENST00000615272 193 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
COL20A1Q9P218 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 RNU1-35P-201ENST00000362782 153 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 Y_RNA.58-201ENST00000362807 102 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 Y_RNA.154-201ENST00000363624 102 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 Y_RNA.259-201ENST00000364619 101 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 RNY3P1-201ENST00000365085 102 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 RNY3-201ENST00000365484 102 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 Y_RNA.490-201ENST00000384413 102 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 RNA5SP390-201ENST00000410191 113 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 RNU4-14P-201ENST00000410858 122 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC008571.1-201ENST00000467232 300 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC092185.1-201ENST00000491371 97 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AP005902.1-201ENST00000521358 186 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 MIR3162-201ENST00000581818 82 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC096772.1-201ENST00000609146 564 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC126177.8-201ENST00000618339 1015 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AC090574.1-201ENST00000623186 233 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 AL359757.2-201ENST00000624309 274 ntBASIC3.2□□□□□ -1.9
COL20A1Q9P218 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL20A1Q9P218 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
COL20A1Q9P218 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 AC099654.7-201ENST00000635788 2127 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNU6-694P-201ENST00000364071 147 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNU6-306P-201ENST00000384617 107 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 AL138827.1-201ENST00000402666 306 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNU6-1050P-201ENST00000410388 107 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 SNORD19B-201ENST00000459623 84 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNU6-307P-201ENST00000516743 106 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 RNA5SP380-201ENST00000517190 98 ntBASIC3.19□□□□□ -1.9
COL20A1Q9P218 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms