| NLGN3 | Q9NZ94 | POLHP1-201 | ENST00000411806 | 470 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | ERLEC1P1-201 | ENST00000433806 | 578 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | LINC01774-201 | ENST00000453569 | 595 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | LINC00971-201 | ENST00000482721 | 535 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | MTCYBP18-201 | ENST00000501056 | 747 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC116655.1-201 | ENST00000508324 | 901 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | LINC02061-201 | ENST00000514225 | 335 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | IL7-206 | ENST00000520269 | 456 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | LINC01195-201 | ENST00000570118 | 451 nt | TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | DLGAP1-AS4-201 | ENST00000582054 | 757 nt | TSL 5 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC092747.3-201 | ENST00000603769 | 301 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | U2.17-201 | ENST00000611454 | 95 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC008162.2-201 | ENST00000613352 | 291 nt | APPRIS P1 TSL 3 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC138627.2-201 | ENST00000624202 | 601 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | Clostridiales-1.2-201 | ENST00000636724 | 160 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | MIR3662-201 | ENST00000637030 | 95 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | ZNF271P-202 | ENST00000465539 | 1970 nt | BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | DDIAS-201 | ENST00000329143 | 3367 nt | APPRIS P2 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | SHOC2-201 | ENST00000265277 | 3691 nt | TSL 2 BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | CCDC66-201 | ENST00000326595 | 3027 nt | APPRIS P3 TSL 1 (best) BASIC | 2.35 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | LRIF1-203 | ENST00000494675 | 1912 nt | APPRIS ALT2 TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | CHORDC1-205 | ENST00000529726 | 4805 nt | TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | RNU6-877P-201 | ENST00000383868 | 107 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | TRAJ21-201 | ENST00000390516 | 55 nt | APPRIS P1 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC009480.1-201 | ENST00000402410 | 412 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | U3.37-201 | ENST00000408528 | 213 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AL589987.2-201 | ENST00000417426 | 582 nt | TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC005482.1-201 | ENST00000420758 | 575 nt | TSL 4 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC093151.3-203 | ENST00000422305 | 514 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AL162400.2-201 | ENST00000427547 | 157 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC064852.1-201 | ENST00000427571 | 851 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | MRPS10P2-201 | ENST00000431226 | 381 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | PLCE1-AS2-203 | ENST00000433038 | 396 nt | TSL 2 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | ZEB1-AS1-204 | ENST00000450834 | 576 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | Y_RNA.654-201 | ENST00000497848 | 106 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC091885.1-201 | ENST00000506658 | 268 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | NAF1-205 | ENST00000509434 | 385 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AF213884.2-201 | ENST00000510417 | 903 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC109927.1-202 | ENST00000511951 | 282 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | RNU6-189P-201 | ENST00000516120 | 101 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | RNA5SP281-201 | ENST00000516504 | 135 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | DISC1FP1-204 | ENST00000563681 | 466 nt | TSL 3 BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | SNORA59B-202 | ENST00000578183 | 701 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AL391813.1-201 | ENST00000603098 | 260 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AL137847.3-201 | ENST00000611521 | 109 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC103705.1-201 | ENST00000619013 | 241 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | Z69720.2-201 | ENST00000624755 | 279 nt | BASIC | 2.34 | □□□□□ -2.03 | | |
| NLGN3 | Q9NZ94 | AC010329.5-201 | ENST00000623497 | 2174 nt | BASIC | 2.34 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 2.34 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | QSER1-204 | ENST00000527788 | 5052 nt | TSL 2 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-82P-201 | ENST00000363970 | 107 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | Y_RNA.573-201 | ENST00000384763 | 105 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-332P-201 | ENST00000391193 | 108 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | PIGP-205 | ENST00000399103 | 656 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-1148P-201 | ENST00000410992 | 104 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RPL30P16-201 | ENST00000419341 | 429 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC092660.1-201 | ENST00000420648 | 371 nt | TSL 2 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | TOMM20P4-201 | ENST00000427861 | 435 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | USP9YP28-201 | ENST00000435142 | 589 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC004383.1-201 | ENST00000438135 | 289 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RBMX2P4-201 | ENST00000441256 | 376 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC004936.1-201 | ENST00000451755 | 361 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC083904.1-201 | ENST00000487828 | 231 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC090096.1-201 | ENST00000489168 | 390 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AKIRIN2P1-201 | ENST00000505898 | 352 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | SNORA31.6-201 | ENST00000516241 | 130 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | SNORD19.2-201 | ENST00000516978 | 73 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | ACA59.2-201 | ENST00000517061 | 156 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC096558.1-203 | ENST00000550516 | 574 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | CPSF6-207 | ENST00000551516 | 234 nt | TSL 2 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | CR383656.11-201 | ENST00000552261 | 498 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | LINC02301-203 | ENST00000555798 | 789 nt | TSL 3 BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AL158827.2-201 | ENST00000602494 | 330 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | APOOP1-201 | ENST00000604695 | 592 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | CTHRC1P1-201 | ENST00000605383 | 469 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC104237.2-201 | ENST00000612456 | 443 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | DAOA-AS1_2.1-201 | ENST00000614829 | 187 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC002553.4-201 | ENST00000616896 | 331 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RMST_7.1-201 | ENST00000621935 | 268 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AL691447.3-201 | ENST00000635020 | 330 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RPAP3-202 | ENST00000380650 | 2149 nt | TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | MTND4P27-201 | ENST00000450813 | 1354 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC080128.1-201 | ENST00000474389 | 1917 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AP006437.1-201 | ENST00000641440 | 3685 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | AC138393.1-203 | ENST00000327086 | 343 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | DLEU2_6.3-201 | ENST00000340052 | 136 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-37P-201 | ENST00000362692 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-11P-201 | ENST00000364234 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU1-91P-201 | ENST00000364746 | 163 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-1280P-201 | ENST00000365211 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-1283P-201 | ENST00000365314 | 105 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-25P-201 | ENST00000383873 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-1-201 | ENST00000383898 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-48P-201 | ENST00000384161 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| NLGN3 | Q9NZ94 | RNU6-36P-201 | ENST00000384172 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |