Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC126177.8-201ENST00000618339 1015 ntBASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.8□□□□□ -1.96
LIN7CQ9NUP9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 RNU6-655P-201ENST00000362858 107 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 SNORD56.3-201ENST00000363507 71 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 Y_RNA.533-201ENST00000384596 114 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 SNORA48.7-201ENST00000391302 135 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 RN7SKP111-201ENST00000410349 271 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AIMP1P2-201ENST00000425294 312 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 GPM6BP3-201ENST00000442797 145 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC073901.1-201ENST00000462471 408 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AL121594.1-201ENST00000475906 575 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 RPL30P1-201ENST00000488676 339 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC092185.1-201ENST00000491371 97 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC097473.1-201ENST00000508142 408 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 SCARNA16.2-201ENST00000516520 172 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 SNORA70.18-201ENST00000516696 98 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 SCARNA3-201ENST00000517097 143 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC104027.1-201ENST00000521887 300 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AL158827.2-201ENST00000602494 330 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AC004832.5-201ENST00000608677 401 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 AL691447.3-201ENST00000635020 330 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 MIR7157-201ENST00000635801 60 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 Z83843.1-201ENST00000604070 3685 ntBASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.79□□□□□ -1.96
LIN7CQ9NUP9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AP000560.1-201ENST00000624150 1937 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC006026.1-201ENST00000444025 1803 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RNU6-461P-201ENST00000364195 107 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 Y_RNA.419-201ENST00000384041 102 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RNU6-968P-201ENST00000384076 107 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 SNORA36A-201ENST00000384221 132 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RN7SKP220-201ENST00000410611 288 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RPL32P35-201ENST00000415214 394 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AL590135.1-201ENST00000422215 156 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC019205.3-201ENST00000424573 156 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC016700.2-201ENST00000446011 156 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RBMY2UP-201ENST00000453474 324 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC140059.1-201ENST00000489238 361 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC015911.1-201ENST00000495111 156 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 SNORA31.16-201ENST00000516773 139 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 CBX3P8-201ENST00000532412 525 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 MIR1254-2-201ENST00000579553 63 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC060766.3-201ENST00000591442 263 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AL050343.2-201ENST00000607338 280 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AL157817.1-201ENST00000614264 790 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 SNORD98-201ENST00000636377 67 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 AC093010.3-201ENST00000570269 15214 ntBASIC2.78□□□□□ -1.96
LIN7CQ9NUP9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AC092268.1-201ENST00000342691 405 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 RNU6-142P-201ENST00000384019 107 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 RPL23AP50-201ENST00000434149 455 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 CST9LP2-201ENST00000437612 320 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AC023141.11-201ENST00000508864 202 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 RNA5SP217-201ENST00000515959 91 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AL133255.1-201ENST00000606374 441 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AL450472.1-202ENST00000637286 180 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AC233981.2-201ENST00000611524 1614 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms