Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL022345.1-201ENST00000607292 135 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AL132822.1-201ENST00000617063 513 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC092140.2-201ENST00000618027 521 ntBASIC1.45□□□□□ -2.18
TREX1Q9NSU2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TREX1Q9NSU2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 MIR29B2-201ENST00000385055 81 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 RNA5SP213-201ENST00000391031 106 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 RAP1BP3-201ENST00000407180 549 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 RN7SKP51-201ENST00000410781 304 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AL356583.2-201ENST00000426536 280 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 HMGB1P18-201ENST00000438801 619 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AL360271.2-201ENST00000447710 161 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 SNORD11.1-201ENST00000459482 85 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 MTND2P14-201ENST00000482139 351 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 RN7SKP256-201ENST00000517201 314 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AP002453.2-201ENST00000533503 320 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC009977.1-201ENST00000586015 570 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC008751.2-201ENST00000597885 980 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 CYP2C61P-201ENST00000604072 290 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC112191.3-201ENST00000604371 277 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC138749.5-201ENST00000611461 208 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC116165.2-201ENST00000616705 206 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC068787.1-201ENST00000623908 691 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AC019226.2-201ENST00000625973 424 ntBASIC1.44□□□□□ -2.18
TREX1Q9NSU2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TREX1Q9NSU2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNU6-500P-201ENST00000362349 107 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNU6-527P-201ENST00000363425 104 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNU1-42P-201ENST00000364033 160 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNU6-371P-201ENST00000364283 108 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 Y_RNA.597-201ENST00000410463 100 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 USP9YP18-201ENST00000425912 695 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RPL39P29-201ENST00000447779 157 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 EPS15P1-201ENST00000448836 336 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 snoU13.14-201ENST00000459372 104 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC021146.2-201ENST00000504736 556 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNU1-86P-201ENST00000516108 154 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 Y_RNA.672-201ENST00000516289 104 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNA5SP61-201ENST00000516453 100 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 RNU1-107P-201ENST00000516617 154 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC022878.1-201ENST00000530684 149 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC015720.1-201ENST00000565251 277 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC245884.10-201ENST00000597355 337 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AL359740.1-201ENST00000624340 592 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.43□□□□□ -2.18
TREX1Q9NSU2 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
TREX1Q9NSU2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 U8.1-201ENST00000362843 134 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RNU6-179P-201ENST00000363350 107 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RNU4-28P-201ENST00000364739 141 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RNU6-61P-201ENST00000365528 109 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 SNORA20.2-201ENST00000383922 131 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RPL23AP32-201ENST00000395315 459 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RNU2-8P-201ENST00000410727 190 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 SRIP3-201ENST00000413200 219 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 BTF3L4P1-201ENST00000413813 468 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC011233.1-201ENST00000422812 283 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL590556.1-201ENST00000423231 483 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL513185.2-201ENST00000425543 193 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL593851.1-201ENST00000426171 157 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 CALM2P2-201ENST00000428512 440 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL591043.1-201ENST00000432461 424 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 UBE2D3P4-201ENST00000441973 436 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AL122001.1-201ENST00000457027 370 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RPL30P6-201ENST00000475925 342 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 RPL30P1-201ENST00000488676 339 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 MTND2P33-201ENST00000506452 1031 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 MTCO3P9-201ENST00000506989 781 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 SNORA3.4-201ENST00000515969 96 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 MTND2P32-201ENST00000521584 1038 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC022616.3-201ENST00000523940 148 ntBASIC1.42□□□□□ -2.18
TREX1Q9NSU2 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.42□□□□□ -2.18
TREX1Q9NSU2 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms