Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC093831.2-201ENST00000624393 3427 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-37P-201ENST00000362692 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 U3.6-201ENST00000363622 211 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-11P-201ENST00000364234 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-25P-201ENST00000383873 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-1-201ENST00000383898 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-48P-201ENST00000384161 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-36P-201ENST00000384172 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-4P-201ENST00000384205 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-5P-201ENST00000384238 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-3P-201ENST00000384314 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-16P-201ENST00000384385 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-15P-201ENST00000384534 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-2-201ENST00000384627 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-29P-201ENST00000384637 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-9-201ENST00000384776 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-33P-201ENST00000384793 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AL445529.1-201ENST00000398713 389 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 MIR1302-11-201ENST00000408051 138 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 MIR1302-9-201ENST00000408365 138 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 MIR1302-10-201ENST00000408734 138 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AF228730.4-201ENST00000421457 183 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC107626.1-201ENST00000471084 183 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU5F-8P-201ENST00000515941 111 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC104576.1-201ENST00000524225 88 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC008121.1-201ENST00000603244 268 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC091152.3-201ENST00000604227 325 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-6P-201ENST00000606623 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 MIR1302-2-201ENST00000607096 138 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 RNU6-91P-201ENST00000607774 107 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AL133215.3-201ENST00000609801 448 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 AC098657.3-201ENST00000620434 263 ntBASIC3.19□□□□□ -1.9
VPS45Q9NRW7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS45Q9NRW7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS45Q9NRW7 RNU6-1188P-201ENST00000363795 107 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 U3.37-201ENST00000408528 213 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 SNORD56-201ENST00000413522 71 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 BMS1P22-201ENST00000414726 313 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 OOSP1P1-201ENST00000423265 274 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 PTGES3P4-201ENST00000426243 356 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 RNU6-1170P-201ENST00000515974 106 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 RNU6-1153P-201ENST00000516760 105 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AC009812.2-201ENST00000517657 457 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AC109479.2-201ENST00000517842 174 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS45Q9NRW7 MIR3616-201ENST00000584070 92 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AC064836.2-201ENST00000609491 462 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AL161423.1-201ENST00000613700 262 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AC007742.2-201ENST00000618226 398 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 AC099654.10-201ENST00000640395 161 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS45Q9NRW7 HAUS6P2-201ENST00000433254 2404 ntBASIC3.18□□□□□ -1.9
VPS45Q9NRW7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AL355596.1-201ENST00000565399 3996 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 RNA5SP432-201ENST00000362480 116 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 SNORA71.1-201ENST00000364523 117 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 RNU6-43P-201ENST00000384302 107 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AL354751.2-201ENST00000415471 210 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 MTCO2P12-201ENST00000427426 682 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 MICF-203ENST00000432679 129 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AL441985.1-201ENST00000457727 251 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 RNU7-152P-201ENST00000458982 64 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 RNU7-187P-201ENST00000458985 68 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 Y_RNA.653-201ENST00000459091 95 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 RN7SL75P-201ENST00000461926 281 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AL442663.2-201ENST00000554385 511 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AL121821.2-201ENST00000556081 394 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 GTF3AP2-201ENST00000557014 266 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 ELOCP29-201ENST00000588193 334 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.17□□□□□ -1.9
VPS45Q9NRW7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS45Q9NRW7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms