Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TLR9Q9NR96 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TLR9Q9NR96 AL356274.2-201ENST00000624379 3752 ntBASIC3.65□□□□□ -1.83
TLR9Q9NR96 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
TLR9Q9NR96 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TLR9Q9NR96 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TLR9Q9NR96 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
TLR9Q9NR96 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TLR9Q9NR96 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 SNORD6-201ENST00000365444 73 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 RNU6-140P-201ENST00000384566 108 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 MIR34A-201ENST00000385130 110 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AL117339.3-201ENST00000418733 162 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 TOMM20P4-201ENST00000427861 435 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AL512844.2-201ENST00000433990 593 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 RPS29P31-201ENST00000446147 164 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AL590664.1-201ENST00000448065 339 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 MTND4LP30-201ENST00000454092 297 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 RPL39P38-201ENST00000467018 153 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 RPL23AP45-201ENST00000476406 468 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 RPL7P47-201ENST00000497299 556 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 HMGB3P17-201ENST00000504195 649 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 RNU6-1282P-201ENST00000516735 96 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 KLKP1-201ENST00000595979 403 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AL033523.1-201ENST00000605153 153 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AL161629.2-201ENST00000615347 275 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 AC130454.1-201ENST00000622948 401 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TLR9Q9NR96 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TLR9Q9NR96 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 AC022336.2-201ENST00000568966 2538 ntBASIC3.64□□□□□ -1.83
TLR9Q9NR96 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
TLR9Q9NR96 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TLR9Q9NR96 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
TLR9Q9NR96 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TLR9Q9NR96 Y_RNA.105-201ENST00000363182 111 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SNORA20.1-201ENST00000364790 130 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 RNU6-217P-201ENST00000384164 104 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TLR9Q9NR96 RNU6-1093P-201ENST00000391194 107 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SNORA48.8-201ENST00000391324 134 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SAR1AP2-201ENST00000392696 594 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 AL357075.1-201ENST00000404107 726 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.63□□□□□ -1.83
TLR9Q9NR96 RPL21P104-201ENST00000464143 478 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SNORA40.15-201ENST00000516884 107 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 AC144568.1-201ENST00000520139 137 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 CASP1P1-201ENST00000526345 212 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 MIR5696-201ENST00000578474 85 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 AL390123.1-201ENST00000603216 237 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 AC008121.1-201ENST00000603244 268 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 AC009314.1-201ENST00000603871 304 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SDR42E1P4-201ENST00000620894 481 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.63□□□□□ -1.83
TLR9Q9NR96 AL137790.1-201ENST00000634283 177 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TLR9Q9NR96 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TLR9Q9NR96 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TLR9Q9NR96 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TLR9Q9NR96 AC090740.1-201ENST00000623193 2262 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 ZNF299P-201ENST00000406845 1804 ntBASIC3.63□□□□□ -1.83
TLR9Q9NR96 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TLR9Q9NR96 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC058791.1-201ENST00000608412 3198 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TLR9Q9NR96 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TLR9Q9NR96 RPL9P7-201ENST00000330965 580 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RNU6-121P-201ENST00000410525 99 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RNU6-130P-201ENST00000411112 103 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC092423.1-201ENST00000430165 186 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.62□□□□□ -1.83
TLR9Q9NR96 AL513043.1-201ENST00000439124 535 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC013470.1-201ENST00000453438 462 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.62□□□□□ -1.83
TLR9Q9NR96 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 LINC01399-202ENST00000458450 244 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RPL9P9-202ENST00000466501 579 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC133134.1-201ENST00000466800 359 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC025465.3-201ENST00000510570 311 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 Y_RNA.673-201ENST00000516306 88 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RNU6-911P-201ENST00000516523 104 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RNU6-703P-201ENST00000516946 107 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RNU6-570P-201ENST00000517051 105 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 RN7SKP40-201ENST00000517211 242 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC109479.2-201ENST00000517842 174 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AP003733.2-201ENST00000529409 171 ntBASIC3.62□□□□□ -1.83
TLR9Q9NR96 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.62□□□□□ -1.83
TLR9Q9NR96 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.62□□□□□ -1.83
TLR9Q9NR96 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.62□□□□□ -1.83
TLR9Q9NR96 ZNF192P1-203ENST00000565888 810 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 148.3 ms