Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 MIR1178-201ENST00000408396 91 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 Y_RNA.597-201ENST00000410463 100 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNU5E-9P-201ENST00000411164 104 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNU6-1199P-201ENST00000411249 104 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RPL23AP36-201ENST00000413895 458 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.94□□□□□ -1.78
SSU72Q9NP77 AC078809.1-201ENST00000427601 140 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 VDAC1P3-201ENST00000434069 851 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RPL37P4-201ENST00000448908 268 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RN7SL826P-201ENST00000479724 288 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 AC016632.1-201ENST00000503994 196 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RN7SKP122-201ENST00000515923 296 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 RNU6-581P-201ENST00000516214 105 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.94□□□□□ -1.78
SSU72Q9NP77 AL138963.2-201ENST00000605137 226 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 AC004825.2-201ENST00000616634 455 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 U7.8-201ENST00000619968 63 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 USP8P1-201ENST00000494673 3183 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 CEP170P1-201ENST00000502249 4587 ntBASIC3.94□□□□□ -1.78
SSU72Q9NP77 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC073073.2-201ENST00000609827 2578 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSU72Q9NP77 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC079741.1-201ENST00000321498 212 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 RNU6-1035P-201ENST00000384477 107 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 MIR607-201ENST00000385241 96 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 RPS29P17-201ENST00000430795 166 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 IFNA11P-201ENST00000446352 526 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 RNU6-191P-201ENST00000516295 94 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 RN7SKP83-201ENST00000516512 178 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 RNU6-1198P-201ENST00000516904 67 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 CKS1BP7-201ENST00000522230 235 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 MIR548AI-201ENST00000579940 88 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC110741.2-201ENST00000605278 268 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 FAM25E-202ENST00000608562 189 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC108706.1-201ENST00000611053 297 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 AC010999.1-201ENST00000611856 324 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 snoU18.1-201ENST00000629629 71 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 MIR3529-201ENST00000637713 78 ntBASIC3.93□□□□□ -1.78
SSU72Q9NP77 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSU72Q9NP77 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSU72Q9NP77 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SSU72Q9NP77 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC110491.1-201ENST00000562191 2010 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 RNU1-132P-201ENST00000364300 164 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 Y_RNA.304-201ENST00000365011 112 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 MIR549A-201ENST00000385268 96 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 RPL21P17-201ENST00000397467 475 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 ELOCP21-201ENST00000412558 336 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 RPS26P42-201ENST00000413485 326 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC112220.1-201ENST00000434628 355 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC244670.1-201ENST00000436879 112 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC073264.2-201ENST00000448886 166 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 RPS23P7-201ENST00000466210 444 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC009163.5-201ENST00000575421 637 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 MIR3145-201ENST00000580727 82 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC007448.1-201ENST00000582714 234 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 OR7E18P-201ENST00000592589 702 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC024220.1-201ENST00000603675 484 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AL359198.2-201ENST00000611836 194 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC092628.2-201ENST00000622492 339 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC007656.2-201ENST00000624902 4547 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 AC022336.2-201ENST00000568966 2538 ntBASIC3.92□□□□□ -1.78
SSU72Q9NP77 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SSU72Q9NP77 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SSU72Q9NP77 ZNF204P-201ENST00000416749 2397 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
SSU72Q9NP77 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSU72Q9NP77 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SSU72Q9NP77 RNU4-80P-201ENST00000363200 141 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 RNU6-799P-201ENST00000363567 107 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 RNA5SP399-201ENST00000364003 117 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 RNU6-622P-201ENST00000384272 103 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 MIR105-2-201ENST00000385083 81 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 Y_RNA.595-201ENST00000410403 105 ntBASIC3.91□□□□□ -1.78
SSU72Q9NP77 NDUFS5P4-201ENST00000412983 318 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms