Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AP001981.2-201ENST00000603241 418 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC174048.1-201ENST00000603389 144 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 DPPA3P3-201ENST00000603842 430 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC099785.1-201ENST00000605697 437 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 MTND5P33-201ENST00000571250 1450 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-1222P-201ENST00000384615 107 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-939P-201ENST00000384634 107 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 MIR597-201ENST00000384968 97 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 MRPL35P3-201ENST00000421557 364 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 TOMM22P2-201ENST00000430735 237 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL606517.1-201ENST00000446914 387 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL353752.1-201ENST00000454946 260 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC087477.1-201ENST00000465747 340 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 HSPE1P4-201ENST00000550617 308 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC073410.2-201ENST00000603240 332 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC013244.2-201ENST00000603396 103 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AP001485.1-201ENST00000604799 199 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL356094.1-201ENST00000624663 1212 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 AL442644.1-201ENST00000454390 3105 ntBASIC0.7□□□□□ -2.3
KIAA1549Q9HCM3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 RNU4-41P-201ENST00000364426 143 ntBASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 SMIM11P1-201ENST00000369586 178 ntBASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 AC211469.2-201ENST00000605461 205 ntBASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 AC112220.2-201ENST00000605513 533 ntBASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-395P-201ENST00000365662 106 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 CBX3P9-201ENST00000402326 552 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RPL21P111-201ENST00000418453 477 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RNU5F-2P-201ENST00000516066 82 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 Y_RNA.689-201ENST00000516589 107 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC090186.1-201ENST00000605991 572 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 MIR15A-201ENST00000607334 83 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC084824.5-201ENST00000612009 413 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AL365204.3-201ENST00000612448 685 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC130324.3-201ENST00000614165 542 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 SNORA4.3-201ENST00000365564 137 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-17P-201ENST00000384245 107 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 SNORD116-12-201ENST00000384468 92 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-18P-201ENST00000384527 107 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 MIR618-201ENST00000385287 98 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 snoU13.14-201ENST00000459372 104 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RPS26P55-201ENST00000471178 356 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RPL39P36-201ENST00000490784 156 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC093259.1-201ENST00000509755 300 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-64P-201ENST00000517119 105 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AL022154.1-201ENST00000604698 785 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AL159153.1-201ENST00000619688 317 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC093648.1-201ENST00000623546 606 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 AC099654.5-201ENST00000636479 350 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 MIR3529-201ENST00000637713 78 ntBASIC0.68□□□□□ -2.3
KIAA1549Q9HCM3 Y_RNA.36-201ENST00000362602 112 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-438P-201ENST00000365561 103 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 Y_RNA.623-201ENST00000411128 95 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AC016831.2-201ENST00000417179 352 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AL365338.1-201ENST00000422282 858 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AC013410.2-201ENST00000422627 201 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 GTF2IP13-201ENST00000438487 386 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 HMGB1P30-201ENST00000492455 606 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 HMGN1P13-201ENST00000505795 138 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 MTND1P36-201ENST00000522384 936 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AC090115.3-201ENST00000553218 849 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 MTND3P13-201ENST00000574391 343 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 MIR1273C-201ENST00000578669 77 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AC068620.3-201ENST00000602749 560 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 AC099654.8-201ENST00000637757 681 ntBASIC0.67□□□□□ -2.3
KIAA1549Q9HCM3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
KIAA1549Q9HCM3 RNU6-655P-201ENST00000362858 107 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms