Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC009233.1-201ENST00000616477 371 ntBASIC2.73□□□□□ -1.97
PCDH9Q9HC56 Z69720.2-201ENST00000624755 279 ntBASIC2.73□□□□□ -1.97
PCDH9Q9HC56 AC110079.1-202ENST00000635213 138 ntBASIC2.73□□□□□ -1.97
PCDH9Q9HC56 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCDH9Q9HC56 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDH9Q9HC56 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCDH9Q9HC56 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RNU6-858P-201ENST00000362436 107 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RNU5E-7P-201ENST00000365290 117 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RNU6-827P-201ENST00000365553 106 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RNU6-1329P-201ENST00000365664 107 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR518D-201ENST00000385014 87 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR9-1-201ENST00000385198 89 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR548K-201ENST00000408406 116 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RNU2-49P-201ENST00000410666 184 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 SNORD56-201ENST00000413522 71 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 HIGD1AP2-201ENST00000446367 280 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC096745.1-201ENST00000509945 370 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RNU6-277P-201ENST00000516272 106 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 Y_RNA.691-201ENST00000516611 103 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 RPPH1-2P-201ENST00000516688 293 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 SNORA31.21-201ENST00000517180 77 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC103996.1-201ENST00000555468 102 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC021739.1-201ENST00000559631 174 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC110491.1-201ENST00000562191 2010 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC011471.1-201ENST00000585766 187 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC073544.1-201ENST00000600110 1595 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AL137843.1-201ENST00000605078 385 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 MIR6128-201ENST00000615528 109 ntBASIC2.72□□□□□ -1.97
PCDH9Q9HC56 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.72□□□□□ -1.97
PCDH9Q9HC56 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.135-201ENST00000363439 95 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 RNU6-95P-201ENST00000384697 107 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 MIR627-201ENST00000384979 97 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 RNA5SP210-201ENST00000391034 120 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AL360182.1-201ENST00000397433 468 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC023141.4-201ENST00000412031 328 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 RPL37P10-201ENST00000412884 288 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 NCOR1P3-201ENST00000420479 303 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 SNAP23P1-201ENST00000433229 246 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 RPS15AP5-201ENST00000436276 388 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 RNU7-23P-201ENST00000459465 62 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC018437.1-201ENST00000492214 406 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 MTCO1P29-201ENST00000496868 288 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 MTND5P5-201ENST00000503764 376 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 FGF7P4-201ENST00000509595 295 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 RNU6-377P-201ENST00000515965 102 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC016727.1-205ENST00000605437 569 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AL359757.2-201ENST00000624309 274 ntBASIC2.71□□□□□ -1.98
PCDH9Q9HC56 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.71□□□□□ -1.98
PCDH9Q9HC56 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AL365361.1-201ENST00000566942 3481 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 RNU6-428P-201ENST00000362942 107 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.339-201ENST00000365325 102 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.384-201ENST00000383909 102 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 Y_RNA.474-201ENST00000384341 102 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 RNU6-306P-201ENST00000384617 107 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 RNU6-1106P-201ENST00000390845 107 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 RNU4-14P-201ENST00000410858 122 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC011816.1-201ENST00000441346 546 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 HMGN2P10-201ENST00000448085 265 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 RNU7-187P-201ENST00000458985 68 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC026801.1-201ENST00000497178 464 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AK3P2-201ENST00000507976 429 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 AC116655.1-201ENST00000508324 901 ntBASIC2.7□□□□□ -1.98
PCDH9Q9HC56 RN7SKP40-201ENST00000517211 242 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms