Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 U6atac.2-201ENST00000408644 118 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 SNORD56-201ENST00000413522 71 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 EIF4EP4-201ENST00000424916 578 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 MTND3P16-201ENST00000452205 344 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 RNU6-333P-201ENST00000459117 107 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 SNRPGP7-201ENST00000469016 106 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC097462.2-201ENST00000504623 481 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 RNA5SP200-201ENST00000516360 103 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 RNU6-720P-201ENST00000516363 108 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC023050.3-201ENST00000541142 333 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC136619.2-201ENST00000563361 631 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 HMGB1P33-201ENST00000563485 527 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC090897.2-201ENST00000581715 130 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC092747.3-201ENST00000603769 301 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 RNU6-85P-201ENST00000605989 107 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC245884.12-201ENST00000615364 59 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 AC024581.2-201ENST00000619986 252 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 YWHAEP7-203ENST00000622054 312 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 U4.7-201ENST00000638126 106 ntBASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
VIPAS39Q9H9C1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-212P-201ENST00000362642 104 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 RNU1-72P-201ENST00000362976 153 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 U3.13-201ENST00000364804 214 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 SNORA67.4-201ENST00000384688 142 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 MIR544A-201ENST00000384855 91 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 MTCO1P21-201ENST00000416634 589 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC008267.5-201ENST00000424928 265 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 SNORD109B-201ENST00000458961 67 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 SNORD109A-201ENST00000459128 67 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC117503.1-201ENST00000472241 394 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 RPL21P99-201ENST00000480369 423 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 CKS1BP2-201ENST00000497342 240 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 RNA5SP24-201ENST00000516478 95 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC090115.3-201ENST00000553218 849 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC103996.1-201ENST00000555468 102 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 ANP32BP3-201ENST00000559213 706 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 MTCO3P23-201ENST00000561363 289 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC073410.2-201ENST00000603240 332 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC107304.1-201ENST00000604229 296 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC009233.1-201ENST00000616477 371 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AL449363.1-201ENST00000617815 186 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC006386.2-201ENST00000624491 75 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 AC012005.1-201ENST00000624575 75 ntBASIC2.21□□□□□ -2.06
VIPAS39Q9H9C1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-827P-201ENST00000365553 106 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-1215P-201ENST00000384441 102 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 MIR186-201ENST00000384988 86 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 SNORD73A-201ENST00000386062 65 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RPL17P50-201ENST00000396131 546 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-648P-201ENST00000410190 107 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-293P-201ENST00000411259 106 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 TIMM9P3-201ENST00000428659 274 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 USP9YP8-201ENST00000441913 500 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 EEF1B2P7-201ENST00000451177 676 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AC080013.2-201ENST00000460866 323 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RN7SL274P-201ENST00000492268 272 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AL138976.2-201ENST00000563989 694 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 RPL30P11-203ENST00000598995 310 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AL138963.2-201ENST00000605137 226 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AL121757.2-201ENST00000611223 313 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 uc_338.15-201ENST00000615470 191 ntBASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
VIPAS39Q9H9C1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.19□□□□□ -2.06
VIPAS39Q9H9C1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.19□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-105P-201ENST00000363909 104 ntBASIC2.19□□□□□ -2.06
VIPAS39Q9H9C1 RNU6-336P-201ENST00000364891 107 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms