Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 HMGB1P24-202ENST00000615653 685 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 AC134503.1-201ENST00000633048 54 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 FAM35CP-201ENST00000554755 2470 ntBASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM54Q9BYV2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.128-201ENST00000363391 112 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.138-201ENST00000363462 102 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 RNA5SP387-201ENST00000364226 106 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 U3.19-201ENST00000390893 196 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC096664.2-201ENST00000411843 406 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC138623.1-201ENST00000418060 216 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AL358075.3-201ENST00000426289 226 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC011816.1-201ENST00000441346 546 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 OSTCP8-201ENST00000445117 448 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 SNRPGP7-201ENST00000469016 106 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AP001025.1-201ENST00000486139 332 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 RAC1P5-201ENST00000512182 576 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 UCA1.1-201ENST00000620952 75 ntBASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
TRIM54Q9BYV2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
TRIM54Q9BYV2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM54Q9BYV2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM54Q9BYV2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.15□□□□□ -1.9
TRIM54Q9BYV2 ZNF299P-201ENST00000406845 1804 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RNA5SP119-201ENST00000362715 117 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RNU6-622P-201ENST00000384272 103 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RNU6-784P-201ENST00000384330 106 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RNU6-1222P-201ENST00000384615 107 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 MIR7-3-201ENST00000384898 110 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 SNORA11.2-201ENST00000408318 127 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.631-201ENST00000459607 101 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC146507.2-201ENST00000460608 476 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RPS26P21-201ENST00000475397 348 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC068781.1-201ENST00000488231 618 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC022493.2-201ENST00000506122 481 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RNU6-470P-201ENST00000515954 104 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 RNU6-976P-201ENST00000516086 111 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 CBX3P8-201ENST00000532412 525 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC007792.1-201ENST00000623023 402 ntBASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM54Q9BYV2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 MTND4P27-201ENST00000450813 1354 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.48-201ENST00000362710 103 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 RNU6-490P-201ENST00000362985 107 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 Y_RNA.533-201ENST00000384596 114 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AL133475.1-201ENST00000404414 305 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 MIR548P-201ENST00000408336 84 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AL353997.1-201ENST00000432936 108 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 RPL30P12-201ENST00000474666 353 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 RPS15AP11-201ENST00000594193 385 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 7SK.7-201ENST00000603504 247 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AC009318.2-201ENST00000610917 651 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AC007742.2-201ENST00000618226 398 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM54Q9BYV2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms