Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RNA5SP293-201ENST00000410527 113 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 MLLT10P1-201ENST00000418346 262 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 YPEL5P1-201ENST00000419731 367 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC099336.2-201ENST00000422457 254 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC098614.2-201ENST00000426040 255 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC109327.2-201ENST00000448339 378 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC099560.2-201ENST00000457554 255 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 RPS26P45-201ENST00000471748 340 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 RPS20P22-201ENST00000473700 357 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC091179.3-201ENST00000474761 144 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 RPL32P34-201ENST00000486380 400 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 RN7SL812P-201ENST00000493791 279 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC079587.1-201ENST00000603846 277 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 AC013412.1-201ENST00000610687 192 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
COL25A1Q9BXS0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNU1-14P-201ENST00000362759 152 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNU6-942P-201ENST00000363002 107 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 SNORA36A-201ENST00000384221 132 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNU6-793P-201ENST00000384233 104 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 MIR3065-201ENST00000390137 79 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNU6-1245P-201ENST00000411130 106 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNA5SP31-201ENST00000411144 127 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 GPM6BP3-201ENST00000442797 145 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 HMGN2P32-201ENST00000444648 269 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 AP000705.1-201ENST00000454567 350 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 snoU13.6-201ENST00000458785 104 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNU6-781P-201ENST00000516377 101 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RNA5SP290-201ENST00000517133 127 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 FAM27D1-201ENST00000612308 341 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 AL365361.1-201ENST00000566942 3481 ntBASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL25A1Q9BXS0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 RNU6-1285P-201ENST00000363480 105 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 RNU6-1205P-201ENST00000363625 106 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 RNU6-454P-201ENST00000364292 107 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 Y_RNA.328-201ENST00000365208 113 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 Y_RNA.346-201ENST00000365385 112 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 U3.37-201ENST00000408528 213 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 AC245047.4-201ENST00000433189 144 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 HSPE1P21-201ENST00000438283 308 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 RN7SL517P-201ENST00000462240 305 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 AC025518.1-201ENST00000479856 347 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 EIF4BP1-201ENST00000554881 351 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 AC091178.2-201ENST00000584401 117 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 PHKBP1-201ENST00000450951 1951 ntBASIC4.44□□□□□ -1.7
COL25A1Q9BXS0 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 AL136164.3-201ENST00000624429 3978 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 RNU6-1336P-201ENST00000383886 109 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 RNU6-592P-201ENST00000411333 103 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 RPS26P42-201ENST00000413485 326 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 AC006026.2-201ENST00000457376 180 ntBASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.43□□□□□ -1.7
COL25A1Q9BXS0 RN7SKP19-201ENST00000516016 252 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms