Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PGBD4P6-201ENST00000421501 610 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 MTATP6P16-201ENST00000434543 526 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AL360271.2-201ENST00000447710 161 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AL137159.1-201ENST00000452808 512 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 SNRPFP4-201ENST00000456366 242 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AP001025.1-201ENST00000486139 332 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AC018868.1-201ENST00000491307 315 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 SCARNA24.1-201ENST00000516465 137 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 Y_RNA.687-201ENST00000516558 91 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AC107953.1-201ENST00000522216 297 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AP005435.4-201ENST00000529514 284 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 BNIP3P6-201ENST00000549284 499 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 SNORD53B-201ENST00000577887 78 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AC098614.4-201ENST00000607601 462 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AP001486.3-201ENST00000615334 372 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 AC019226.2-201ENST00000625973 424 ntBASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RPAP1Q9BWH6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 RNU1-23P-201ENST00000363361 144 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 RNY4P34-201ENST00000364779 95 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 EEF1A1P40-201ENST00000412883 573 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC074117.2-201ENST00000417130 397 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 MTCYBP5-201ENST00000423752 1135 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC006026.1-201ENST00000444025 1803 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 PMCHL2-203ENST00000457791 237 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC107032.1-201ENST00000485945 480 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 MTCYBP35-201ENST00000503630 1137 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC116562.3-201ENST00000506136 177 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 Vault.3-201ENST00000516676 95 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 RNA5SP137-201ENST00000516833 135 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 RNU6-586P-201ENST00000517265 104 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC068587.5-201ENST00000528506 175 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AL360219.1-201ENST00000610230 366 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC009159.2-201ENST00000617603 606 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AC023510.2-201ENST00000622162 746 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 AL603839.4-201ENST00000624658 1005 ntBASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RPAP1Q9BWH6 RNU6-179P-201ENST00000363350 107 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 RNU6-60P-201ENST00000364792 103 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 MIR320A-201ENST00000385302 82 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 MTCO3P5-201ENST00000433620 714 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 AL133217.1-201ENST00000450980 425 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 RNU1-86P-201ENST00000516108 154 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 RNU1-107P-201ENST00000516617 154 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 AC090572.1-201ENST00000519251 160 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 AC087883.1-201ENST00000551882 391 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 MIR4529-201ENST00000578110 78 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 MIR5692A1-201ENST00000580523 69 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 AC090578.1-201ENST00000604955 591 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 MIR6504-201ENST00000613520 61 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 SCARNA4-202ENST00000625402 129 ntBASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RPAP1Q9BWH6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 Y_RNA.576-201ENST00000384781 102 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 RNA5SP390-201ENST00000410191 113 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 RNU6-387P-201ENST00000411331 105 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 CALM2P2-201ENST00000428512 440 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC073614.1-201ENST00000438690 650 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 SNORA43.2-201ENST00000516652 128 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 RNU6-685P-201ENST00000517088 95 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC034114.1-201ENST00000520293 285 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 IMMP1LP2-201ENST00000552954 492 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC093249.1-201ENST00000567049 203 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 MTATP6P24-201ENST00000576835 677 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 MIR3915-201ENST00000578518 97 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AL031274.2-201ENST00000599419 203 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 ELOCP5-201ENST00000604924 333 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AC093648.1-201ENST00000623546 606 ntBASIC1.87□□□□□ -2.11
RPAP1Q9BWH6 AL359740.1-201ENST00000624340 592 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms