Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NDC1Q9BTX1 AC002546.1-201ENST00000588041 2504 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 OR56A5-201ENST00000340110 738 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 ARL5AP4-201ENST00000430731 512 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 RN7SKP210-201ENST00000459176 261 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 RPL23AP14-201ENST00000468281 468 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 RPS27AP10-201ENST00000496103 208 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 RNU6-579P-201ENST00000516879 102 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 SNORA31.18-201ENST00000517043 134 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 AC007458.1-201ENST00000542812 373 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 AC130454.1-201ENST00000622948 401 ntBASIC3.37□□□□□ -1.87
NDC1Q9BTX1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NDC1Q9BTX1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RNU6-105P-201ENST00000363909 104 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.350-201ENST00000365409 98 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.405-201ENST00000383979 100 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.451-201ENST00000384200 100 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RNU6-1026P-201ENST00000384465 108 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.524-201ENST00000384564 100 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.561-201ENST00000384694 100 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 SNORA12.2-201ENST00000391040 156 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 MIR190B-201ENST00000401119 79 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 MTCYBP2-201ENST00000407745 171 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 MIR1183-201ENST00000408856 89 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AP000907.1-201ENST00000428428 510 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AL591043.1-201ENST00000432461 424 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RPEP5-201ENST00000441137 268 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC125238.1-201ENST00000448842 249 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RPL30P14-201ENST00000482744 348 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RPL32P34-201ENST00000486380 400 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RNU2-27P-201ENST00000516185 142 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC034114.1-201ENST00000520293 285 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 MIR3200-201ENST00000580767 85 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 AC020895.1-201ENST00000595362 272 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
NDC1Q9BTX1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NDC1Q9BTX1 Z75746.1-201ENST00000440243 2080 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RNU6-942P-201ENST00000363002 107 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RNU6-283P-201ENST00000364788 107 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RNU2-38P-201ENST00000410856 79 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RNU6-130P-201ENST00000411112 103 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 DBIP2-201ENST00000419076 262 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RPL23AP82-202ENST00000427528 469 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RBMY2UP-201ENST00000453474 324 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RPL21P10-201ENST00000463521 490 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 RPS29P20-201ENST00000489592 171 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AC026784.1-201ENST00000507986 352 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AL391261.3-201ENST00000557194 520 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 MIR4738-201ENST00000579134 87 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 MIR5195-201ENST00000583555 115 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AL451007.1-201ENST00000595491 289 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 uc_338.32-201ENST00000615087 172 ntBASIC3.35□□□□□ -1.87
NDC1Q9BTX1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
NDC1Q9BTX1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 RNU1-76P-201ENST00000362903 159 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.105-201ENST00000363182 111 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 RNU1-100P-201ENST00000365255 165 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.358-201ENST00000365491 99 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 RNU6-611P-201ENST00000384276 104 ntBASIC3.34□□□□□ -1.87
NDC1Q9BTX1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NDC1Q9BTX1 BTF3L4P2-201ENST00000392798 346 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms