Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-336P-201ENST00000364891 107 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Y_RNA.358-201ENST00000365491 99 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Y_RNA.405-201ENST00000383979 100 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Y_RNA.451-201ENST00000384200 100 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 RNU6-1026P-201ENST00000384465 108 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Y_RNA.524-201ENST00000384564 100 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Y_RNA.552-201ENST00000384665 112 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Y_RNA.561-201ENST00000384694 100 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.13□□□□□ -1.91
TIMP4Q99727 AC098614.2-201ENST00000426040 255 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.13□□□□□ -1.91
TIMP4Q99727 AC079354.2-201ENST00000453523 154 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 RPS29P27-201ENST00000463711 170 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AC008155.2-201ENST00000464337 397 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 RN7SL442P-201ENST00000473804 320 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AL049830.2-201ENST00000480072 201 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.13□□□□□ -1.91
TIMP4Q99727 AP003733.2-201ENST00000529409 171 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.13□□□□□ -1.91
TIMP4Q99727 AC073410.2-201ENST00000603240 332 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 AC005046.1-201ENST00000608515 625 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
TIMP4Q99727 AC091152.2-201ENST00000591628 2569 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 Z75746.1-201ENST00000440243 2080 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TIMP4Q99727 AP000560.1-201ENST00000624150 1937 ntBASIC3.13□□□□□ -1.91
TIMP4Q99727 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.13□□□□□ -1.91
TIMP4Q99727 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TIMP4Q99727 MTND5P6-201ENST00000422338 1798 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TIMP4Q99727 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
TIMP4Q99727 AC073346.2-201ENST00000624724 2058 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 RNU1-75P-201ENST00000347264 129 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 Y_RNA.14-201ENST00000362415 103 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 Y_RNA.60-201ENST00000362831 98 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 RNU6-227P-201ENST00000362865 103 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 Y_RNA.105-201ENST00000363182 111 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 RNU6-140P-201ENST00000384566 108 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 MIR190B-201ENST00000401119 79 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.12□□□□□ -1.91
TIMP4Q99727 Z82210.1-201ENST00000440037 231 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 FCF1P4-201ENST00000448326 183 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TIMP4Q99727 AC013470.1-201ENST00000453438 462 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 AC006539.3-201ENST00000454258 129 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 LINC01399-202ENST00000458450 244 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 RPL30P10-201ENST00000488148 337 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 HMGB1P35-201ENST00000503360 598 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.12□□□□□ -1.91
TIMP4Q99727 RN7SKP272-201ENST00000516988 232 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 AC109329.1-201ENST00000518744 317 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.12□□□□□ -1.91
TIMP4Q99727 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.12□□□□□ -1.91
TIMP4Q99727 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.12□□□□□ -1.91
TIMP4Q99727 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.12□□□□□ -1.91
TIMP4Q99727 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.12□□□□□ -1.91
TIMP4Q99727 MIR4782-201ENST00000577987 79 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 AL109918.3-201ENST00000603072 338 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 AC008962.1-201ENST00000605729 304 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 AC097372.5-201ENST00000623665 376 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 U6.104-201ENST00000637979 90 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 U4.7-201ENST00000638126 106 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TIMP4Q99727 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TIMP4Q99727 AL359693.1-201ENST00000614959 2407 ntBASIC3.12□□□□□ -1.91
TIMP4Q99727 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
TIMP4Q99727 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TIMP4Q99727 MFSD8-233ENST00000641482 4860 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TIMP4Q99727 RNU6-78P-201ENST00000362897 107 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 SNORA20.1-201ENST00000364790 130 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RNU6-72P-201ENST00000384285 79 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 SNORA12.2-201ENST00000391040 156 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RN7SKP111-201ENST00000410349 271 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RNU6-130P-201ENST00000411112 103 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RNU2-71P-201ENST00000411395 189 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RPL21P38-201ENST00000418090 167 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.11□□□□□ -1.91
TIMP4Q99727 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.11□□□□□ -1.91
TIMP4Q99727 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.11□□□□□ -1.91
TIMP4Q99727 RPEP5-201ENST00000441137 268 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RN7SKP210-201ENST00000459176 261 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RN7SL601P-201ENST00000471221 293 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC098869.1-201ENST00000481627 292 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 MTND1P19-201ENST00000511780 315 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.11□□□□□ -1.91
TIMP4Q99727 Y_RNA.673-201ENST00000516306 88 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 RNU6-911P-201ENST00000516523 104 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC034114.1-201ENST00000520293 285 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC104027.1-201ENST00000521887 300 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC010186.2-204ENST00000537668 439 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.11□□□□□ -1.91
TIMP4Q99727 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 AL161756.2-201ENST00000604597 246 ntBASIC3.11□□□□□ -1.91
TIMP4Q99727 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TIMP4Q99727 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms