Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC026271.5-201ENST00000577873 130 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 uc_338.15-201ENST00000615470 191 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNU6-317P-201ENST00000384031 107 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RPS15AP10-201ENST00000432472 382 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 GTF2IP3-201ENST00000433887 494 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNVU1-2-201ENST00000516326 135 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 MTCYBP27-201ENST00000555160 670 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC012669.1-201ENST00000603209 283 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 MIR103A1-201ENST00000362165 78 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNU4-84P-201ENST00000364200 139 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNU6-439P-201ENST00000384188 106 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNU6-880P-201ENST00000384526 107 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 SNORA75.3-201ENST00000391231 150 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 SNORD99-201ENST00000408612 74 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RPS15AP38-201ENST00000413110 372 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC092685.1-201ENST00000447960 1243 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC107027.2-201ENST00000512197 115 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNU6-320P-201ENST00000516511 106 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNA5SP168-201ENST00000516642 112 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.17□□□□□ -2.44
COL12A1Q99715 AC090079.2-201ENST00000575289 768 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 BX284668.6-201ENST00000606899 438 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 MIR5739-201ENST00000619803 80 ntBASIC-0.17□□□□□ -2.44
COL12A1Q99715 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 DHFRP6-201ENST00000401776 268 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AC139712.2-201ENST00000424302 339 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL12A1Q99715 GTF2IP20-201ENST00000431663 360 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.18□□□□□ -2.44
COL12A1Q99715 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL12A1Q99715 MTND2P19-201ENST00000449129 1012 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 RPS29P27-201ENST00000463711 170 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AC105758.1-201ENST00000506038 399 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AC090330.1-201ENST00000588646 764 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.18□□□□□ -2.44
COL12A1Q99715 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 MIR520F-201ENST00000384824 87 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 MIR644A-201ENST00000385262 94 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 RNU6-360P-201ENST00000390944 104 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.18□□□□□ -2.44
COL12A1Q99715 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AC008498.1-201ENST00000613012 531 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AC097372.4-201ENST00000625025 466 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 AL049641.1-201ENST00000441055 1948 ntBASIC-0.18□□□□□ -2.44
COL12A1Q99715 RNU6-546P-201ENST00000383991 107 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 MIR942-201ENST00000401111 86 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 BX664727.1-201ENST00000416024 466 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC098869.1-201ENST00000481627 292 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 SNORA31.6-201ENST00000516241 130 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 SNORA70.22-201ENST00000517160 124 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC023442.1-201ENST00000531247 422 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC090578.1-201ENST00000604955 591 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC022960.3-201ENST00000619794 441 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC040168.1-201ENST00000623594 991 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 MIR302D-201ENST00000362275 68 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 SNORA18.1-201ENST00000363418 128 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 C1DP1-201ENST00000426049 402 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 RPL17P35-201ENST00000432217 549 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 RAB11AP1-201ENST00000442978 646 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 AL359854.1-201ENST00000614203 1594 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
COL12A1Q99715 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 MIR106A-201ENST00000384870 81 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AL590632.1-201ENST00000424289 371 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 RAC1P8-201ENST00000427086 527 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 LARP7P4-201ENST00000481075 878 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC016065.2-201ENST00000514530 444 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC021231.3-201ENST00000558497 370 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 NAMPTP3-201ENST00000569273 224 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 AC025627.3-201ENST00000582078 182 ntBASIC-0.19□□□□□ -2.44
COL12A1Q99715 MIRLET7D-201ENST00000362263 87 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 SNORD115-24-201ENST00000363528 82 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC114482.1-201ENST00000418010 247 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC007742.1-201ENST00000425789 329 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 AC073261.1-201ENST00000429409 121 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 ELOCP26-201ENST00000436067 329 ntBASIC-0.2□□□□□ -2.44
COL12A1Q99715 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.2□□□□□ -2.44
COL12A1Q99715 KATNBL1P6-201ENST00000453433 915 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms