Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 AL139286.2-201ENST00000606838 396 ntBASIC1.28□□□□□ -2.2
VAT1Q99536 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.28□□□□□ -2.2
VAT1Q99536 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.28□□□□□ -2.2
VAT1Q99536 MTND4P9-201ENST00000507819 1346 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
VAT1Q99536 SNORD114-6-201ENST00000364393 72 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
VAT1Q99536 AC007969.2-201ENST00000441891 191 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 KATNBL1P3-201ENST00000443475 909 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 AC112204.1-201ENST00000502591 103 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 RN7SKP219-201ENST00000516825 296 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.27□□□□□ -2.21
VAT1Q99536 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.27□□□□□ -2.21
VAT1Q99536 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.27□□□□□ -2.21
VAT1Q99536 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.27□□□□□ -2.21
VAT1Q99536 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.27□□□□□ -2.21
VAT1Q99536 AC091135.1-201ENST00000585943 307 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 AC022022.2-201ENST00000602989 360 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 AL031281.1-201ENST00000604049 488 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 AL136363.2-201ENST00000604173 851 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 AL590240.4-201ENST00000616908 390 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.27□□□□□ -2.21
VAT1Q99536 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
VAT1Q99536 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.26□□□□□ -2.21
VAT1Q99536 AL391994.1-201ENST00000254724 282 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 SNORA24.1-201ENST00000384401 135 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 RNU6-482P-201ENST00000391068 107 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 NCOR1P3-201ENST00000420479 303 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.26□□□□□ -2.21
VAT1Q99536 AC007283.2-201ENST00000424739 197 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 SDAD1P3-201ENST00000427380 333 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.26□□□□□ -2.21
VAT1Q99536 UBE2V1P12-201ENST00000503954 474 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC010587.1-201ENST00000505809 469 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 MTND2P33-201ENST00000506452 1031 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 RBBP4P6-201ENST00000508098 202 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.26□□□□□ -2.21
VAT1Q99536 AP003181.2-201ENST00000528941 181 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.26□□□□□ -2.21
VAT1Q99536 MTND4P33-201ENST00000556706 766 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC090888.2-201ENST00000559765 1144 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 SUB1P4-201ENST00000566062 339 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC023043.2-201ENST00000589678 1026 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.26□□□□□ -2.21
VAT1Q99536 MIR8074-201ENST00000615081 81 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC104010.1-201ENST00000616889 150 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC026585.1-201ENST00000619582 524 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC131159.1-201ENST00000621854 213 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC130454.1-201ENST00000622948 401 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 AC008993.2-201ENST00000631744 806 ntBASIC1.26□□□□□ -2.21
VAT1Q99536 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
VAT1Q99536 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VAT1Q99536 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VAT1Q99536 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
VAT1Q99536 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.25□□□□□ -2.21
VAT1Q99536 RNU6-78P-201ENST00000362897 107 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 SNORA62.1-201ENST00000364287 154 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 RNU6-533P-201ENST00000384144 107 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 RAP1BP3-201ENST00000407180 549 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 EEF1A1P40-201ENST00000412883 573 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 RPL21P90-201ENST00000415692 466 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VAT1Q99536 MTCO2P23-201ENST00000425216 680 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AC137499.1-201ENST00000427602 88 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 CALM2P2-201ENST00000428512 440 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AC108667.1-201ENST00000428618 249 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AL354941.1-201ENST00000438600 464 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AL590365.1-201ENST00000450788 243 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.25□□□□□ -2.21
VAT1Q99536 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.25□□□□□ -2.21
VAT1Q99536 RNU5A-4P-201ENST00000516588 111 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 MTND2P7-201ENST00000521337 640 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.25□□□□□ -2.21
VAT1Q99536 AC091489.2-201ENST00000566263 604 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.25□□□□□ -2.21
VAT1Q99536 MIR4999-201ENST00000585029 91 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AC018714.1-201ENST00000605028 208 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 PRR13P7-201ENST00000605538 430 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AC010608.3-201ENST00000625048 527 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 AL157786.1-207ENST00000627771 695 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
VAT1Q99536 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
VAT1Q99536 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
VAT1Q99536 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
VAT1Q99536 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.24□□□□□ -2.21
VAT1Q99536 MIR620-201ENST00000385232 95 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.24□□□□□ -2.21
VAT1Q99536 MTCYBP36-201ENST00000404146 440 ntBASIC1.24□□□□□ -2.21
VAT1Q99536 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.24□□□□□ -2.21
VAT1Q99536 AC119618.1-201ENST00000434191 222 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms