Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-250P-201ENST00000516958 103 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
RPRD1AQ96P16 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 AC007792.1-201ENST00000623023 402 ntBASIC1.79□□□□□ -2.12
RPRD1AQ96P16 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 RNU6-116P-201ENST00000384042 109 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 RNA5SP212-201ENST00000391223 107 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AL627390.1-201ENST00000396055 340 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 OR6C66P-201ENST00000414917 930 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 MTND4P20-201ENST00000424125 869 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 MTND1P22-201ENST00000510572 951 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC117532.1-201ENST00000514638 323 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC018630.3-201ENST00000542637 96 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC087883.1-201ENST00000551882 391 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 HSBP1P1-201ENST00000555205 166 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC015712.3-201ENST00000559380 164 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC025754.2-201ENST00000606491 432 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AL360219.1-201ENST00000610230 366 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC122133.1-201ENST00000613964 233 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 AC008250.2-201ENST00000615261 205 ntBASIC1.78□□□□□ -2.12
RPRD1AQ96P16 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.78□□□□□ -2.12
RPRD1AQ96P16 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 RNU5E-7P-201ENST00000365290 117 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 MIR29B2-201ENST00000385055 81 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 HMGN1P14-201ENST00000412459 517 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 RPS20P15-201ENST00000412792 311 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 CYCSP46-201ENST00000423569 204 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 ISCA1P6-201ENST00000427740 390 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AC009961.2-201ENST00000435771 251 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL022238.1-201ENST00000442557 355 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 MTND2P4-201ENST00000445034 1004 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 SNRPFP4-201ENST00000456366 242 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 HMGN2P23-201ENST00000456759 269 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 RPL30P1-201ENST00000488676 339 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AC091135.1-201ENST00000585943 307 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AL136363.2-201ENST00000604173 851 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AC108479.2-201ENST00000617314 601 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AC011155.2-201ENST00000623202 216 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 AC097372.5-201ENST00000623665 376 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
RPRD1AQ96P16 MTND5P17-201ENST00000418405 1603 ntBASIC1.77□□□□□ -2.13
RPRD1AQ96P16 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 SNORA62.1-201ENST00000364287 154 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 SNORD14D-201ENST00000384390 87 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 RNU6-45P-201ENST00000384471 107 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 MIR29C-201ENST00000385231 88 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 RNU6-550P-201ENST00000391057 101 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 RPS15AP10-201ENST00000432472 382 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 IFNA20P-201ENST00000436840 528 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 RPL39P29-201ENST00000447779 157 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AL122001.1-201ENST00000457027 370 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 PTP4A1P4-201ENST00000512479 322 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 RNU6-410P-201ENST00000517006 107 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AC098848.2-201ENST00000588023 330 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 MIR502-201ENST00000606349 86 ntBASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
RPRD1AQ96P16 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 RNU6-743P-201ENST00000364151 106 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 RNU6-1164P-201ENST00000364428 107 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 RNU6-74P-201ENST00000384235 107 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 MIR597-201ENST00000384968 97 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 RNA5SP465-201ENST00000391195 109 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 GAPDHP17-201ENST00000449858 1001 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 AL162395.1-201ENST00000457882 422 ntBASIC1.75□□□□□ -2.13
RPRD1AQ96P16 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.75□□□□□ -2.13
RPRD1AQ96P16 DUXAP5-201ENST00000529668 529 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms