Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 BNIP3P31-201ENST00000604515 566 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AL022154.1-201ENST00000604698 785 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 MIR15A-201ENST00000607334 83 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 AC245297.2-201ENST00000610119 565 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 SCARNA4-202ENST00000625402 129 ntBASIC0.86□□□□□ -2.27
CCDC42Q96M95 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
CCDC42Q96M95 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC42Q96M95 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC42Q96M95 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CCDC42Q96M95 MIR548B-201ENST00000385247 97 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 FGF7P8-201ENST00000402994 292 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 USP9YP33-201ENST00000412220 421 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 RPS15AP12-201ENST00000419498 388 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 TIMM9P1-201ENST00000436122 256 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 RNA5SP216-201ENST00000516111 123 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 RNA5SP437-201ENST00000517249 129 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 MTATP6P2-201ENST00000603319 678 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 MZT1P2-201ENST00000604387 248 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC124016.2-201ENST00000610058 665 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.85□□□□□ -2.27
CCDC42Q96M95 RMST_4.1-201ENST00000616886 107 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 AC005858.4-201ENST00000623191 700 ntBASIC0.85□□□□□ -2.27
CCDC42Q96M95 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC42Q96M95 OR4G2P-201ENST00000328113 903 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 BTF3L4P1-201ENST00000413813 468 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC42Q96M95 LARP1BP3-201ENST00000437229 869 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 FTH1P25-201ENST00000447665 469 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AC006026.2-201ENST00000457376 180 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.84□□□□□ -2.27
CCDC42Q96M95 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.84□□□□□ -2.27
CCDC42Q96M95 AL163195.1-201ENST00000496941 348 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 MTND2P33-201ENST00000506452 1031 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 SNORA31.16-201ENST00000516773 139 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 RNA5SP481-201ENST00000516814 122 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC42Q96M95 VN1R82P-201ENST00000601481 356 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AL138889.2-201ENST00000603883 242 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AC090578.1-201ENST00000604955 591 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 AL020996.3-201ENST00000606617 222 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 BX284668.6-201ENST00000606899 438 ntBASIC0.84□□□□□ -2.27
CCDC42Q96M95 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.84□□□□□ -2.27
CCDC42Q96M95 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
CCDC42Q96M95 RNU6-560P-201ENST00000364007 108 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 SNORA25-201ENST00000384384 134 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC092809.3-201ENST00000415453 231 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 VPS26BP1-201ENST00000417155 755 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC123900.1-201ENST00000420390 96 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC013410.2-201ENST00000422627 201 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 SNX2P2-201ENST00000424553 323 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 MTND1P30-201ENST00000441241 901 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC132479.1-201ENST00000449160 144 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC42Q96M95 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC119751.4-201ENST00000507498 357 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 SNORD60.2-201ENST00000516883 86 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC091135.1-201ENST00000585943 307 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AC098848.2-201ENST00000588023 330 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AL353778.1-201ENST00000603149 408 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AL391646.1-201ENST00000603860 190 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 AL136363.2-201ENST00000604173 851 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 FRG1KP-201ENST00000623592 341 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
CCDC42Q96M95 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CCDC42Q96M95 RNU6-462P-201ENST00000362659 105 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 SNORD32B-201ENST00000364460 84 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 MIR515-2-201ENST00000384883 83 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 MIR515-1-201ENST00000384884 83 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 MIR194-1-201ENST00000384892 85 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 MIR10A-201ENST00000385043 110 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC42Q96M95 AC245047.4-201ENST00000433189 144 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.82□□□□□ -2.28
CCDC42Q96M95 AC092473.1-201ENST00000441098 221 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.82□□□□□ -2.28
CCDC42Q96M95 AC005741.1-201ENST00000511094 432 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 RNU5A-4P-201ENST00000516588 111 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 SNORA43.2-201ENST00000516652 128 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 SUMO2P18-201ENST00000518873 252 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 VN1R107P-201ENST00000601784 209 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 AL596327.1-201ENST00000603629 213 ntBASIC0.82□□□□□ -2.28
CCDC42Q96M95 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms