Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 RNY3P14-201ENST00000384309 102 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 BTF3L4P2-201ENST00000392798 346 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AC245054.2-201ENST00000415639 319 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 AL031659.1-201ENST00000447075 539 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 MTND1P17-201ENST00000448961 204 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 RN7SL807P-201ENST00000470923 297 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AP005902.1-201ENST00000521358 186 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AC115990.1-201ENST00000526957 301 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AP005639.2-201ENST00000527592 928 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 HPRT1P3-201ENST00000539521 576 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 MIR5680-201ENST00000577577 84 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 MIR4790-201ENST00000577799 79 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AC105245.1-201ENST00000581934 244 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AC090616.3-201ENST00000582184 217 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 UBE2V2P2-201ENST00000587677 504 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 uc_338.5-201ENST00000611839 155 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 AL355073.2-201ENST00000612106 557 ntBASIC3.07□□□□□ -1.92
CCDC138Q96M89 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC138Q96M89 SNORD62.1-201ENST00000362541 86 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 Y_RNA.151-201ENST00000363566 112 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 SNORD32A-201ENST00000364805 84 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RPL21P75-201ENST00000396599 483 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RPL21P28-201ENST00000401418 483 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CCDC138Q96M89 PDCL2P1-201ENST00000419302 352 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 AL139281.1-201ENST00000422120 335 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 AL353572.1-201ENST00000442490 417 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RN7SL863P-201ENST00000462370 296 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RPL21P39-201ENST00000463605 483 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 SNRPGP7-201ENST00000469016 106 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 AC087190.1-201ENST00000484462 480 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC138Q96M89 AC093591.1-201ENST00000491435 481 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RPL21P16-201ENST00000495531 483 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RNU2-53P-201ENST00000516257 147 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC138Q96M89 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC138Q96M89 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC138Q96M89 AL133215.3-201ENST00000609801 448 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 AL442067.2-201ENST00000614033 363 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC138Q96M89 MIR3651-201ENST00000630427 90 ntBASIC3.06□□□□□ -1.92
CCDC138Q96M89 RNU6-655P-201ENST00000362858 107 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 RNU6-1285P-201ENST00000363480 105 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 SNORD56.5-201ENST00000364281 72 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 SNORD81.2-201ENST00000365153 76 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 SNORA7.4-201ENST00000384249 137 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 RNU6-790P-201ENST00000384479 105 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 SNORD15B-201ENST00000384714 146 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 NCOR1P3-201ENST00000420479 303 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC008267.5-201ENST00000424928 265 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 MTATP6P23-201ENST00000440153 476 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC073901.1-201ENST00000462471 408 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 RPL30P1-201ENST00000488676 339 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 RN7SKP40-201ENST00000517211 242 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC018889.1-201ENST00000605372 397 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 YPEL5P2-201ENST00000605553 359 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC019193.3-201ENST00000609144 554 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC069234.5-201ENST00000611056 416 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC018692.3-201ENST00000623929 123 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 MIR622-201ENST00000638396 96 ntBASIC3.05□□□□□ -1.92
CCDC138Q96M89 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
CCDC138Q96M89 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC138Q96M89 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC138Q96M89 Y_RNA.40-201ENST00000362645 93 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 RNU6-1210P-201ENST00000363775 107 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC138Q96M89 SNORA46-201ENST00000384762 135 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 RNU6-220P-201ENST00000390919 107 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 MIR548K-201ENST00000408406 116 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 RNU2-25P-201ENST00000411041 191 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AC074085.1-201ENST00000413598 418 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 AIMP1P2-201ENST00000425294 312 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 RPL23AP95-201ENST00000426806 265 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 AC078809.1-201ENST00000427601 140 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 MTND3P9-201ENST00000429526 346 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC138Q96M89 HMGB1P18-201ENST00000438801 619 ntBASIC3.04□□□□□ -1.92
CCDC138Q96M89 MTND5P20-201ENST00000448677 143 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms