Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.49□□□□□ -2.17
C9orf72Q96LT7 PCMTD1P2-201ENST00000565017 355 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
C9orf72Q96LT7 AL031775.1-201ENST00000607014 887 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 TUSC7.1-201ENST00000610969 165 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 AC104010.1-201ENST00000616889 150 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 AL157786.1-207ENST00000627771 695 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
C9orf72Q96LT7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 RNU5F-6P-201ENST00000362979 116 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 RNU4-1-201ENST00000363925 141 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 RNU6-501P-201ENST00000364072 100 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 RPL21P90-201ENST00000415692 466 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 ELOCP4-201ENST00000420090 333 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 Z82205.1-201ENST00000428456 297 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 VN1R108P-201ENST00000431580 830 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 RPS15AP10-201ENST00000432472 382 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AL360271.2-201ENST00000447710 161 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AL122001.1-201ENST00000457027 370 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 MTCO2P29-201ENST00000465212 189 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 MTCYBP40-201ENST00000509390 1135 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC117522.1-201ENST00000509821 380 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 RNU6-311P-201ENST00000516224 102 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AL354943.1-201ENST00000572103 781 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 WISP1-OT1-201ENST00000602893 642 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC005014.3-201ENST00000605985 190 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AL159153.1-201ENST00000619688 317 ntBASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
C9orf72Q96LT7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
C9orf72Q96LT7 RAP1BP3-201ENST00000407180 549 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 Y_RNA.608-201ENST00000410647 95 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL590556.1-201ENST00000423231 483 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL589872.1-201ENST00000426602 288 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL365184.2-201ENST00000431139 435 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 RPS24P1-201ENST00000438550 371 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL606662.1-201ENST00000445763 553 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 RPL39P29-201ENST00000447779 157 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.47□□□□□ -2.17
C9orf72Q96LT7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL163540.1-201ENST00000485382 386 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 MTND2P33-201ENST00000506452 1031 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 MTCO3P9-201ENST00000506989 781 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 FAM206BP-201ENST00000510179 541 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AC009646.1-201ENST00000510455 318 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 RNU1-86P-201ENST00000516108 154 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 RNU1-107P-201ENST00000516617 154 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AL356057.1-201ENST00000533798 831 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AC015720.1-201ENST00000565251 277 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AC137800.2-201ENST00000574375 120 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 MIR5697-201ENST00000578045 78 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 AC016925.2-201ENST00000605108 242 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.47□□□□□ -2.17
C9orf72Q96LT7 RMST_7.1-201ENST00000621935 268 ntBASIC1.47□□□□□ -2.17
C9orf72Q96LT7 WWP1P1-201ENST00000466609 2769 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 Y_RNA.4-201ENST00000362333 112 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 RNU6-23P-201ENST00000363283 107 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 SNORD113-6-201ENST00000363345 75 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 RNU6-371P-201ENST00000364283 108 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 MIR558-201ENST00000384920 94 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AC068050.1-201ENST00000394891 380 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 RNU6-174P-201ENST00000410406 106 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 CBX3P6-201ENST00000430257 527 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 RNVU1-2-201ENST00000516326 135 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AC087441.2-201ENST00000529141 262 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AP002453.2-201ENST00000533503 320 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AC008521.1-201ENST00000587471 187 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AL136363.2-201ENST00000604173 851 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AL078595.3-201ENST00000623815 1166 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AC007671.2-201ENST00000637344 619 ntBASIC1.46□□□□□ -2.18
C9orf72Q96LT7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.45□□□□□ -2.18
C9orf72Q96LT7 RNU1-62P-201ENST00000362599 164 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 RNU6-78P-201ENST00000362897 107 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 RNU5E-7P-201ENST00000365290 117 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 MIR30A-201ENST00000385092 71 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 EEF1A1P40-201ENST00000412883 573 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
C9orf72Q96LT7 AC098592.1-201ENST00000419352 333 ntBASIC1.45□□□□□ -2.18
C9orf72Q96LT7 AC007098.1-201ENST00000420122 367 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms