Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS50Q96JG6 AC010680.1-201ENST00000590024 3590 ntBASIC3.11□□□□□ -1.91
VPS50Q96JG6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS50Q96JG6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS50Q96JG6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS50Q96JG6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VPS50Q96JG6 ADAM3A-203ENST00000461344 2157 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 RNU6-1280P-201ENST00000365211 107 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 RNU6-308P-201ENST00000390957 107 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AL513475.1-201ENST00000406602 315 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 Z92545.1-201ENST00000411782 234 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 MTND3P9-201ENST00000429526 346 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 RPS15AP10-201ENST00000432472 382 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC116655.1-201ENST00000508324 901 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 RAC1P5-201ENST00000512182 576 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 SCARNA15.1-201ENST00000516384 125 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 RNU6-56P-201ENST00000516986 93 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 MIR3171-201ENST00000584270 74 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 AL162713.1-201ENST00000604480 262 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 YPEL5P2-201ENST00000605553 359 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC091903.1-201ENST00000624322 454 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC134503.1-201ENST00000633048 54 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.1□□□□□ -1.91
VPS50Q96JG6 AC138915.1-201ENST00000565427 1685 ntBASIC3.1□□□□□ -1.91
VPS50Q96JG6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VPS50Q96JG6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.91
VPS50Q96JG6 AL161431.1-201ENST00000618966 4205 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS50Q96JG6 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 RNU6-105P-201ENST00000363909 104 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 Y_RNA.197-201ENST00000364004 102 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 U8.8-201ENST00000365399 135 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS50Q96JG6 SNORD116-20-201ENST00000384529 92 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 SNORA46-201ENST00000384762 135 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 MIR521-1-201ENST00000384902 87 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 RNU6-1106P-201ENST00000390845 107 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 RPS29P13-201ENST00000402041 169 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 RNU2-49P-201ENST00000410666 184 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 AC096664.2-201ENST00000411843 406 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.09□□□□□ -1.91
VPS50Q96JG6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS50Q96JG6 RPL27AP5-201ENST00000469428 449 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 MRPL42P6-201ENST00000486397 371 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.09□□□□□ -1.91
VPS50Q96JG6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.09□□□□□ -1.91
VPS50Q96JG6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.09□□□□□ -1.91
VPS50Q96JG6 MTCO3P13-201ENST00000577757 781 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 AC022432.1-201ENST00000595739 310 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 AC002064.3-201ENST00000623448 346 ntBASIC3.09□□□□□ -1.91
VPS50Q96JG6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VPS50Q96JG6 MTND5P10-201ENST00000603719 1809 ntBASIC3.09□□□□□ -1.92
VPS50Q96JG6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.09□□□□□ -1.92
VPS50Q96JG6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS50Q96JG6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 MTND5P30-201ENST00000452896 1731 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS50Q96JG6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 RNU6-858P-201ENST00000362436 107 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 RNU6-527P-201ENST00000363425 104 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 Y_RNA.326-201ENST00000365176 113 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 RNU6-933P-201ENST00000384424 107 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 SNORA75.6-201ENST00000391318 127 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 MIR548P-201ENST00000408336 84 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 RNU6-174P-201ENST00000410406 106 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC243428.1-201ENST00000421099 264 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 RPS15AP5-201ENST00000436276 388 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 RPL39P40-201ENST00000445481 146 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 Z96811.1-201ENST00000445880 108 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 AL118496.2-201ENST00000448300 230 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS50Q96JG6 RPS29P27-201ENST00000463711 170 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 RPS29P2-201ENST00000479278 136 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 RNU6-612P-201ENST00000516909 102 ntBASIC3.08□□□□□ -1.92
VPS50Q96JG6 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms