Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL669831.3-213ENST00000636676 183 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 KPNA2P1-201ENST00000458289 1591 ntBASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDK5RAP3Q96JB5 AC138915.1-201ENST00000565427 1685 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC073346.2-201ENST00000624724 2058 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC010889.1-201ENST00000566193 2666 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 SNORD56.1-201ENST00000362913 68 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MIR521-1-201ENST00000384902 87 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 RPS29P13-201ENST00000402041 169 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC236972.1-201ENST00000433225 199 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 SNORD5.1-201ENST00000458800 75 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.653-201ENST00000459091 95 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC008571.1-201ENST00000467232 300 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MED28P2-201ENST00000475771 317 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 PTP4A1P4-201ENST00000512479 322 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-612P-201ENST00000516909 102 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AP002404.1-201ENST00000532005 451 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC009163.5-201ENST00000575421 637 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 CPDP1-201ENST00000579660 283 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC011471.1-201ENST00000585766 187 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AC007318.2-201ENST00000620999 243 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MIR3651-201ENST00000630427 90 ntBASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDK5RAP3Q96JB5 MIR422A-201ENST00000362286 90 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 SNORD56.5-201ENST00000364281 72 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-19P-201ENST00000384718 107 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-750P-201ENST00000390946 107 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AC074117.2-201ENST00000417130 397 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AL133396.1-201ENST00000432048 687 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 DAP3P1-201ENST00000441522 278 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AC124916.1-201ENST00000444020 547 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AC117440.1-201ENST00000474107 571 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 RPS29P2-201ENST00000479278 136 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 RPL7P42-201ENST00000481005 679 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 SNORD19.2-201ENST00000516978 73 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AC091152.3-201ENST00000604227 325 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 AC098657.3-201ENST00000620434 263 ntBASIC3.35□□□□□ -1.87
CDK5RAP3Q96JB5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 RNU4-76P-201ENST00000364509 141 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 Y_RNA.579-201ENST00000390939 94 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AL138885.1-201ENST00000405921 675 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6-1245P-201ENST00000411130 106 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AF228730.4-201ENST00000421457 183 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 PTGES3P4-201ENST00000426243 356 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 MTND3P9-201ENST00000429526 346 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 RNU5F-8P-201ENST00000515941 111 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 ACA59.1-201ENST00000515966 143 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 SNORA31.18-201ENST00000517043 134 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AP005902.1-201ENST00000521358 186 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AC109446.1-201ENST00000566172 220 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AC011494.1-201ENST00000596454 237 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AC018889.1-201ENST00000605372 397 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 MIR8057-201ENST00000620957 69 ntBASIC3.34□□□□□ -1.87
CDK5RAP3Q96JB5 AC000403.1-201ENST00000613696 3585 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.2-201ENST00000362330 96 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.315-201ENST00000365117 102 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.404-201ENST00000383978 102 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 RNU6-310P-201ENST00000384655 107 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 Y_RNA.646-201ENST00000410980 101 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 MTCO3P10-201ENST00000455912 772 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC133134.1-201ENST00000466800 359 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC107626.1-201ENST00000471084 183 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC114801.2-201ENST00000503825 781 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC107016.2-201ENST00000547968 190 ntBASIC3.33□□□□□ -1.88
CDK5RAP3Q96JB5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms