Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 RNA5SP510-201ENST00000364697 99 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 Z92545.1-201ENST00000411782 234 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 RN7SL610P-201ENST00000463845 291 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 RN7SL197P-201ENST00000466981 299 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 IGLVIV-65-201ENST00000517313 360 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 MAPK10-304ENST00000641341 3984 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 AC009962.1-201ENST00000567327 3813 ntBASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 AC239868.2-201ENST00000564237 4527 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 SNORA11.3-201ENST00000408471 128 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 AL035398.1-201ENST00000430869 322 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 RN7SL72P-201ENST00000460697 269 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 RNU2-34P-201ENST00000516534 121 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 AP003484.1-201ENST00000530974 250 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 SNORA11.6-201ENST00000619030 128 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 MFSD8-236ENST00000641509 4050 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 AL137141.1-201ENST00000624622 4836 ntBASIC5.06□□□□□ -1.6
MS4A3Q96HJ5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 Y_RNA.547-201ENST00000384654 119 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC006539.1-201ENST00000481419 501 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC006445.1-201ENST00000491925 405 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC108729.3-201ENST00000513484 108 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 SNORD46.2-201ENST00000516021 102 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AL110115.1-201ENST00000614396 364 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 MIR376B-201ENST00000614515 100 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 MIR6133-201ENST00000617057 108 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 Y_RNA.788-201ENST00000622394 112 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
MS4A3Q96HJ5 AC093831.2-201ENST00000624393 3427 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 MIR126-201ENST00000362291 85 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 RN7SKP15-201ENST00000364742 309 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 RNU6-234P-201ENST00000365229 104 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 RNU6-129P-201ENST00000391022 107 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 SNORD77B-201ENST00000391112 67 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 U3.32-201ENST00000408116 212 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 MIR1294-201ENST00000408503 142 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AL645608.4-201ENST00000423619 154 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AC233266.1-201ENST00000454518 96 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 MIR449C-201ENST00000516047 92 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 HIGD1AP1-201ENST00000550979 275 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 MIR4660-201ENST00000583549 74 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AC008521.2-201ENST00000591021 259 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AL133481.2-203ENST00000607558 139 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AC242852.1-201ENST00000612151 96 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AC244015.1-201ENST00000622301 99 ntBASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
MS4A3Q96HJ5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms