Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC007998.5-201ENST00000622938 237 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC110801.1-201ENST00000623590 212 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 AC090740.1-201ENST00000623193 2262 ntBASIC3.55□□□□□ -1.84
CHFRQ96EP1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CHFRQ96EP1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 SNORD81.1-201ENST00000363064 77 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 RNU6-371P-201ENST00000364283 108 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 RNU6-637P-201ENST00000384050 107 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 RNU6-790P-201ENST00000384479 105 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 Y_RNA.541-201ENST00000384640 113 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 MIR634-201ENST00000385208 97 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 U3.39-201ENST00000408569 239 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 Y_RNA.592-201ENST00000410274 109 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 snoU109.4-201ENST00000458953 143 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 RPL7P23-201ENST00000493874 747 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC010469.2-201ENST00000496412 480 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 AL359273.1-201ENST00000510918 627 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC113155.1-201ENST00000511141 769 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 RNU6-27P-201ENST00000516146 107 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 MTND5P41-201ENST00000517498 206 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC022559.1-201ENST00000520905 205 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC126177.3-201ENST00000551839 688 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 AMZ2P1-203ENST00000565833 850 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 MIR4300-201ENST00000581016 96 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 AC007619.2-201ENST00000605743 379 ntBASIC3.54□□□□□ -1.84
CHFRQ96EP1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHFRQ96EP1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.54□□□□□ -1.84
CHFRQ96EP1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CHFRQ96EP1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHFRQ96EP1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHFRQ96EP1 SNORD51-201ENST00000384320 80 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 RNU6-14P-201ENST00000384630 106 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 U3.19-201ENST00000390893 196 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 SNORA69.1-201ENST00000390904 137 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 SNORA48.5-201ENST00000391143 135 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 HSPE1P8-201ENST00000406997 288 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 RNU6-712P-201ENST00000410558 100 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 RNU6-735P-201ENST00000410612 107 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 RN7SKP51-201ENST00000410781 304 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 RNU6-325P-201ENST00000411132 105 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AL160275.3-201ENST00000423876 471 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.53□□□□□ -1.84
CHFRQ96EP1 AC092423.1-201ENST00000430165 186 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AL445305.1-201ENST00000432577 575 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AC008481.1-201ENST00000463278 396 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AL049873.1-201ENST00000480540 376 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 SERF1AP1-201ENST00000514575 187 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 SNRPGP16-201ENST00000533275 226 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.53□□□□□ -1.84
CHFRQ96EP1 MIR3976-201ENST00000606807 139 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 AC103988.1-201ENST00000566382 2177 ntBASIC3.53□□□□□ -1.84
CHFRQ96EP1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CHFRQ96EP1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.53□□□□□ -1.84
CHFRQ96EP1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
CHFRQ96EP1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CHFRQ96EP1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CHFRQ96EP1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.85
CHFRQ96EP1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHFRQ96EP1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 RNU6-47P-201ENST00000383866 107 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 MIR628-201ENST00000385229 95 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 MTND3P9-201ENST00000429526 346 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 RN7SL594P-201ENST00000470590 287 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 RNU1-103P-201ENST00000516502 125 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 RN7SKP83-201ENST00000516512 178 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 SCARNA24.2-201ENST00000516968 130 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 AP006245.1-201ENST00000522549 120 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CHFRQ96EP1 AC005476.1-201ENST00000554427 397 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 MIR5680-201ENST00000577577 84 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 MIR376A1-201ENST00000616574 68 ntBASIC3.52□□□□□ -1.85
CHFRQ96EP1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CHFRQ96EP1 Z75746.1-201ENST00000440243 2080 ntBASIC3.51□□□□□ -1.85
CHFRQ96EP1 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.51□□□□□ -1.85
CHFRQ96EP1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CHFRQ96EP1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CHFRQ96EP1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms