Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTP4Q96DX8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RTP4Q96DX8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTP4Q96DX8 RNU6-593P-201ENST00000364716 112 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 RNU6-1040P-201ENST00000383974 107 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 SNORA1.3-201ENST00000384676 136 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 MIR517A-201ENST00000385001 87 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RTP4Q96DX8 AL445529.1-201ENST00000398713 389 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AL512633.1-201ENST00000399931 655 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.81□□□□□ -1.96
RTP4Q96DX8 AC113618.1-201ENST00000416747 285 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 UBE2V1P4-201ENST00000425374 344 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AL160004.2-201ENST00000432935 350 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 SNORD5.1-201ENST00000458800 75 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AC090525.1-201ENST00000479116 478 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AC113155.1-201ENST00000511141 769 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 RN7SKP132-201ENST00000516001 208 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 RNU6-1045P-201ENST00000516321 107 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 SCARNA16.2-201ENST00000516520 172 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 RNU6-1282P-201ENST00000516735 96 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 RNU1-54P-201ENST00000517181 120 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AC022634.1-201ENST00000520765 532 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AL121917.1-203ENST00000605534 577 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AL162730.1-201ENST00000605734 292 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.81□□□□□ -1.96
RTP4Q96DX8 MIR6076-201ENST00000617521 113 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 XIST_intron.1-201ENST00000619444 68 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 SNORA50A-202ENST00000629536 136 ntBASIC2.81□□□□□ -1.96
RTP4Q96DX8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.81□□□□□ -1.96
RTP4Q96DX8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RTP4Q96DX8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RTP4Q96DX8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RTP4Q96DX8 Y_RNA.148-201ENST00000363557 117 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 Y_RNA.202-201ENST00000364083 110 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 RNU6-166P-201ENST00000384371 107 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 Y_RNA.496-201ENST00000384444 101 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 RNU6-1160P-201ENST00000384546 104 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 AC243428.1-201ENST00000421099 264 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 RPL21P40-201ENST00000428586 483 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 AL645568.3-201ENST00000433683 316 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 AL590664.1-201ENST00000448065 339 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 RPL12P25-201ENST00000455592 494 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 AC018437.1-201ENST00000492214 406 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 HMGB1P30-201ENST00000492455 606 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 PTP4A1P4-201ENST00000512479 322 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 RNU6-1046P-201ENST00000516538 107 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 SNORA31.19-201ENST00000517079 126 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RTP4Q96DX8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 MIR4474-201ENST00000579189 78 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 HSPE1P7-201ENST00000604681 321 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 AC007485.1-201ENST00000616755 206 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 PISRT1.1-201ENST00000616930 107 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 FAM35BP-202ENST00000497389 3337 ntBASIC2.8□□□□□ -1.96
RTP4Q96DX8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RTP4Q96DX8 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RTP4Q96DX8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 FTLP6-201ENST00000355274 422 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 MIR412-201ENST00000362142 91 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 Y_RNA.28-201ENST00000362554 111 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 Y_RNA.112-201ENST00000363250 102 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 SNORD21-201ENST00000383953 95 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 SNORA18.3-201ENST00000384122 132 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 Y_RNA.463-201ENST00000384271 102 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 MIR592-201ENST00000384959 97 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 MIR10A-201ENST00000385043 110 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 SNORA40C-201ENST00000391285 128 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 Y_RNA.623-201ENST00000411128 95 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 AL030996.1-201ENST00000411430 235 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 Z82210.1-201ENST00000440037 231 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 AC006445.2-201ENST00000510061 472 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 RNU6-572P-201ENST00000516724 80 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 RN7SKP295-201ENST00000517264 153 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 AC069113.1-201ENST00000517763 267 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 TRAV32-201ENST00000553993 340 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
RTP4Q96DX8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.79□□□□□ -1.96
RTP4Q96DX8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms