Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 CYCSP33-201ENST00000414485 327 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RPL21P90-201ENST00000415692 466 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC011233.1-201ENST00000422812 283 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC000111.3-201ENST00000433478 193 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 HMGB1P31-201ENST00000437242 427 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU1-98P-201ENST00000458992 160 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU6-970P-201ENST00000516312 107 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 RNU2-46P-201ENST00000517038 113 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC090572.1-201ENST00000519251 160 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC078795.2-201ENST00000602835 1252 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC009159.2-201ENST00000617603 606 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC138649.3-201ENST00000622154 254 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC068787.1-201ENST00000623908 691 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AL359740.1-201ENST00000624340 592 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 AC019226.2-201ENST00000625973 424 ntBASIC1.57□□□□□ -2.16
ECHDC3Q96DC8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MIR126-201ENST00000362291 85 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 SNORD56.1-201ENST00000362913 68 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 U8.10-201ENST00000384260 133 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 RNU2-8P-201ENST00000410727 190 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC009310.1-201ENST00000414414 451 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC245102.2-201ENST00000448956 180 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AP005660.1-201ENST00000522972 293 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AP003072.2-201ENST00000527756 676 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MIR5692A1-201ENST00000580523 69 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MIR4303-201ENST00000581299 66 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC005771.1-201ENST00000585581 349 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC004908.3-201ENST00000610248 625 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 AC026585.1-201ENST00000619582 524 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.56□□□□□ -2.16
ECHDC3Q96DC8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 RNU1-58P-201ENST00000362413 163 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 RNU6-212P-201ENST00000362642 104 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 Y_RNA.576-201ENST00000384781 102 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 Y_RNA.598-201ENST00000410480 95 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 UBE2V1P4-201ENST00000425374 344 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 CBX3P6-201ENST00000430257 527 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 RPS15AP10-201ENST00000432472 382 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC104850.1-201ENST00000435940 476 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 RPL30P12-201ENST00000474666 353 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 RPL30P6-201ENST00000475925 342 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC116562.3-201ENST00000506136 177 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 MTND3P25-201ENST00000509243 135 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 RN7SKP265-201ENST00000516448 223 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC068587.5-201ENST00000528506 175 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AP005435.4-201ENST00000529514 284 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC009094.1-201ENST00000564443 426 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC091135.1-201ENST00000585943 307 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 AC012065.4-201ENST00000602445 679 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 WISP1-OT1-201ENST00000602893 642 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
ECHDC3Q96DC8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 snoU2_19.1-201ENST00000362361 80 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 RNU6-661P-201ENST00000362409 107 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 U8.3-201ENST00000363321 132 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 RNU6-179P-201ENST00000363350 107 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 RNU6-60P-201ENST00000364792 103 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 SNORD115-7-201ENST00000365306 82 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 SNORA20.2-201ENST00000383922 131 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 MIR1323-201ENST00000408090 73 ntBASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.54□□□□□ -2.16
ECHDC3Q96DC8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms