Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 MRPS36P5-201ENST00000551909 298 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC012414.2-201ENST00000559474 187 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL139286.2-201ENST00000606838 396 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC106800.4-201ENST00000614905 153 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AL132822.1-201ENST00000617063 513 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.41□□□□□ -2.34
TTC28Q96AY4 AC023934.1-201ENST00000574529 2389 ntBASIC0.41□□□□□ -2.34
TTC28Q96AY4 RNU6-1094P-201ENST00000362416 104 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RNU5E-1-201ENST00000362477 120 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
TTC28Q96AY4 Y_RNA.432-201ENST00000384087 111 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 Y_RNA.446-201ENST00000384178 104 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC002542.1-201ENST00000440683 193 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC002381.1-201ENST00000447049 280 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 MEMO1P3-201ENST00000459811 302 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RPS27P22-201ENST00000478056 241 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 RNU5B-3P-201ENST00000516601 115 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 BBIP1P1-201ENST00000602999 279 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 NDUFA8P1-201ENST00000605525 367 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC107075.1-201ENST00000613695 314 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RNU6-1216P-201ENST00000362590 107 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RNU6-359P-201ENST00000365466 108 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 Y_RNA.498-201ENST00000384460 102 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 MTCO1P56-201ENST00000401674 224 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RAP1BP3-201ENST00000407180 549 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 MIR1262-201ENST00000408276 93 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC079140.2-201ENST00000506193 142 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 Y_RNA.674-201ENST00000516362 113 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RNU6-1247P-201ENST00000516622 98 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 RNU6-840P-201ENST00000517275 65 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AP003122.4-201ENST00000530980 758 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC025627.3-201ENST00000582078 182 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC090330.1-201ENST00000588646 764 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AF129408.1-201ENST00000608767 431 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 AC013476.2-201ENST00000614456 459 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 MIR1264-201ENST00000616374 69 ntBASIC0.4□□□□□ -2.35
TTC28Q96AY4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.4□□□□□ -2.35
TTC28Q96AY4 Y_RNA.255-201ENST00000364581 97 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 SNORD116-23-201ENST00000384645 92 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RNU1-119P-201ENST00000391122 165 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TTC28Q96AY4 RN7SKP142-201ENST00000411236 328 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RAC1P8-201ENST00000427086 527 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
TTC28Q96AY4 MTCYBP15-201ENST00000433123 1127 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RPS15AP9-201ENST00000439856 381 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 DYNLT3P2-201ENST00000442517 295 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC026410.2-201ENST00000460281 156 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC074198.2-201ENST00000508153 258 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RNU6-1183P-201ENST00000517054 60 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RNU6-902P-201ENST00000517212 91 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC109329.1-201ENST00000518744 317 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 MIR3167-201ENST00000579623 85 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC005261.5-201ENST00000596280 355 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC073544.2-201ENST00000601155 540 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 VN1R82P-201ENST00000601481 356 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RAC1P9-201ENST00000604990 392 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC069304.2-201ENST00000605154 435 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC091304.9-201ENST00000612091 226 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC005332.6-201ENST00000613178 446 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 uc_338.6-201ENST00000613544 171 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TTC28Q96AY4 LINC02555-201ENST00000563933 1951 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
TTC28Q96AY4 RNU6-839P-201ENST00000363347 108 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 SNORA63D-201ENST00000364359 132 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RNU6-432P-201ENST00000384196 109 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 BTF3L4P2-201ENST00000392798 346 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 DHFRP6-201ENST00000401776 268 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 PDCL2P1-201ENST00000419302 352 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC013410.2-201ENST00000422627 201 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC092634.2-201ENST00000428146 1010 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.39□□□□□ -2.35
TTC28Q96AY4 CYP2C59P-201ENST00000457790 269 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RPL39P28-201ENST00000465655 155 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 RPL21P47-201ENST00000483696 477 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC010409.1-201ENST00000487382 476 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC099513.1-201ENST00000490423 301 ntBASIC0.39□□□□□ -2.35
TTC28Q96AY4 AC018868.1-201ENST00000491307 315 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms