Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.98□□□□□ -1.77
BRF1Q92994 MIR3128-201ENST00000581957 66 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.98□□□□□ -1.77
BRF1Q92994 AL355877.2-201ENST00000603670 358 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 AL391261.4-201ENST00000616012 481 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 MIR6134-201ENST00000617606 109 ntBASIC3.98□□□□□ -1.77
BRF1Q92994 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BRF1Q92994 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BRF1Q92994 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.98□□□□□ -1.77
BRF1Q92994 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BRF1Q92994 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.98□□□□□ -1.77
BRF1Q92994 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF1Q92994 AL161912.2-201ENST00000565707 3007 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BRF1Q92994 AL356274.2-201ENST00000624379 3752 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 Y_RNA.105-201ENST00000363182 111 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BRF1Q92994 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.97□□□□□ -1.77
BRF1Q92994 RNY3P4-201ENST00000384428 101 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 RN7SKP111-201ENST00000410349 271 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 RNU6-121P-201ENST00000410525 99 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.97□□□□□ -1.77
BRF1Q92994 SDAD1P3-201ENST00000427380 333 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.97□□□□□ -1.77
BRF1Q92994 AC017083.1-201ENST00000428093 483 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF1Q92994 RPL23AP22-201ENST00000437556 453 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.97□□□□□ -1.77
BRF1Q92994 HMGB3P8-201ENST00000449709 577 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.97□□□□□ -1.77
BRF1Q92994 RPL23AP14-201ENST00000468281 468 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 TRBVB-201ENST00000477100 408 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 RPL7P47-201ENST00000497299 556 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 ANXA2P1-201ENST00000505539 926 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 Y_RNA.713-201ENST00000517013 96 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 RNU6-1231P-201ENST00000517185 103 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF1Q92994 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.97□□□□□ -1.77
BRF1Q92994 AC096772.1-201ENST00000609146 564 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 SCARNA4-201ENST00000629045 128 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 AC241585.2-209ENST00000638217 143 ntBASIC3.97□□□□□ -1.77
BRF1Q92994 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF1Q92994 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.97□□□□□ -1.77
BRF1Q92994 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.96□□□□□ -1.77
BRF1Q92994 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRF1Q92994 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRF1Q92994 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRF1Q92994 RNU6-527P-201ENST00000363425 104 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 SNORA62.3-201ENST00000365110 153 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 RNU6-898P-201ENST00000365627 104 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 Y_RNA.478-201ENST00000384358 107 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
BRF1Q92994 NDUFS5P4-201ENST00000412983 318 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF1Q92994 AL358453.1-201ENST00000422522 250 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF1Q92994 snoU13.30-201ENST00000458951 104 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 RPL23AP49-201ENST00000492925 468 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 AC010469.2-201ENST00000496412 480 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 FCF1P8-201ENST00000510322 597 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 SNORA67.7-201ENST00000516664 135 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF1Q92994 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF1Q92994 MIR3158-1-201ENST00000583596 81 ntBASIC3.96□□□□□ -1.78
BRF1Q92994 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.96□□□□□ -1.78
BRF1Q92994 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.96□□□□□ -1.78
BRF1Q92994 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRF1Q92994 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
BRF1Q92994 AC233981.2-201ENST00000611524 1614 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 AC009541.1-201ENST00000438279 2662 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRF1Q92994 RNU6-212P-201ENST00000362642 104 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 MIR490-201ENST00000384865 128 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRF1Q92994 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.95□□□□□ -1.78
BRF1Q92994 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.95□□□□□ -1.78
BRF1Q92994 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.95□□□□□ -1.78
BRF1Q92994 TMEM167AP1-201ENST00000423409 219 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
BRF1Q92994 CYCSP32-201ENST00000440548 321 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.95□□□□□ -1.78
BRF1Q92994 SNORA84-201ENST00000459229 133 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 RNU2-58P-201ENST00000516403 183 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 RNU6-570P-201ENST00000517051 105 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 AC090617.3-201ENST00000573670 475 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 AL356157.2-201ENST00000605122 111 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 SNORA51-201ENST00000606420 132 ntBASIC3.95□□□□□ -1.78
BRF1Q92994 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRF1Q92994 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRF1Q92994 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
BRF1Q92994 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRF1Q92994 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRF1Q92994 SNORA20.1-201ENST00000364790 130 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 RNU6-1286P-201ENST00000383871 107 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 RNU6-1035P-201ENST00000384477 107 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 RNU2-64P-201ENST00000411315 191 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.94□□□□□ -1.78
BRF1Q92994 RPL21P38-201ENST00000418090 167 ntBASIC3.94□□□□□ -1.78
BRF1Q92994 EIF1AXP1-201ENST00000419267 435 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms