Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 TRAV32-201ENST00000553993 340 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AC103987.3-201ENST00000582071 292 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AL139286.2-201ENST00000606838 396 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AC012409.4-201ENST00000612923 249 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AL121890.5-201ENST00000620848 304 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AC130454.1-201ENST00000622948 401 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AP002782.1-201ENST00000623107 614 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 MIR1248-201ENST00000629190 106 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 AL445984.1-201ENST00000637834 659 ntBASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
CLHC1Q8NHS4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RNU6-212P-201ENST00000362642 104 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 SNORD56.2-201ENST00000363242 71 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RNU6-414P-201ENST00000363705 104 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RNU6-271P-201ENST00000363858 105 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 SNORA62.1-201ENST00000364287 154 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RNU6-203P-201ENST00000384038 104 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RNU6-160P-201ENST00000384591 107 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RPS3AP36-201ENST00000398190 775 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 MIR1267-201ENST00000408723 78 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RPL23AP36-201ENST00000413895 458 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 RPS15AP12-201ENST00000419498 388 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC108667.1-201ENST00000428618 249 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AL360271.2-201ENST00000447710 161 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 DUXAP8-207ENST00000456786 622 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC112204.1-201ENST00000502591 103 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 MTCO3P9-201ENST00000506989 781 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AP003033.1-201ENST00000527244 415 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC087441.2-201ENST00000529141 262 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 ADI1P3-201ENST00000549509 470 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC068338.1-201ENST00000565567 176 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC137800.2-201ENST00000574375 120 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 MIR3169-201ENST00000578032 83 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC091135.1-201ENST00000585943 307 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AC022022.2-201ENST00000602989 360 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AL031667.3-201ENST00000620124 655 ntBASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
CLHC1Q8NHS4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 MTND4P9-201ENST00000507819 1346 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 Y_RNA.18-201ENST00000362461 102 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RNU6-371P-201ENST00000364283 108 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RPL22P17-201ENST00000438729 315 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC007969.2-201ENST00000441891 191 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RN7SKP210-201ENST00000459176 261 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RPL31P58-201ENST00000469001 379 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AL163540.1-201ENST00000485382 386 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 MTCYBP18-201ENST00000501056 747 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC116347.2-201ENST00000514912 523 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RNU5A-4P-201ENST00000516588 111 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RPL21P5-201ENST00000554662 472 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC005668.1-201ENST00000571142 476 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AC105148.1-201ENST00000604961 409 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CLHC1Q8NHS4 RNU6-457P-201ENST00000363999 107 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RNA5SP493-201ENST00000364115 91 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RNU6-809P-201ENST00000384461 107 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RNU6-1179P-201ENST00000384667 107 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 MIR758-201ENST00000390227 88 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RAP1BP3-201ENST00000407180 549 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 Y_RNA.595-201ENST00000410403 105 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 EEF1A1P40-201ENST00000412883 573 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AC137499.1-201ENST00000427602 88 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RNU1-123P-201ENST00000458950 160 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AC087477.1-201ENST00000465747 340 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 RPS26P55-201ENST00000471178 356 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AP000797.1-201ENST00000478870 387 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AC009646.1-201ENST00000510455 318 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 MTND4P33-201ENST00000556706 766 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AC019288.1-201ENST00000557918 224 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 AC090888.2-201ENST00000559765 1144 ntBASIC1.26□□□□□ -2.21
CLHC1Q8NHS4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms