Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 SMURF2P1-201ENST00000514992 481 ntBASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 SNRPGP18-201ENST00000553000 214 ntBASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 MIR4738-201ENST00000579134 87 ntBASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 CPDP1-201ENST00000579660 283 ntBASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 MIR4273-201ENST00000582824 84 ntBASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 AC110491.1-201ENST00000562191 2010 ntBASIC3.77□□□□□ -1.81
SMC1BQ8NDV3 ADAM3A-203ENST00000461344 2157 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 RNA5SP38-201ENST00000410750 119 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 MIR2053-201ENST00000459295 91 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 snoU13.15-201ENST00000459407 104 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 RPS29P20-201ENST00000489592 171 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 RPL23AP49-201ENST00000492925 468 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 AC008413.1-201ENST00000511864 177 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 SNORA43.2-201ENST00000516652 128 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 AP000867.2-201ENST00000532468 320 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 AC024153.1-201ENST00000603103 365 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 PLCE1P1-201ENST00000622094 305 ntBASIC3.76□□□□□ -1.81
SMC1BQ8NDV3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC009487.2-201ENST00000420969 6821 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 RNU6-428P-201ENST00000362942 107 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 RNU6-527P-201ENST00000363425 104 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 MIR521-1-201ENST00000384902 87 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 snosnR66.1-201ENST00000391095 99 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 BPY2DP-201ENST00000422208 265 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC006989.1-201ENST00000427212 131 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 snoU13.23-201ENST00000458863 104 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC083906.5-201ENST00000503722 328 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 PTP4A1P4-201ENST00000512479 322 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 RNU6-264P-201ENST00000517134 104 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC020895.1-201ENST00000595362 272 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AL158827.2-201ENST00000602494 330 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 SNRPGP17-201ENST00000603780 214 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 MIR3976-201ENST00000606807 139 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 AL691447.3-201ENST00000635020 330 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 MIR3199-2-201ENST00000636243 86 ntBASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC1BQ8NDV3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 CDC27P3-201ENST00000635418 1910 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 RNU6-842P-201ENST00000384269 107 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 SNORD15B-201ENST00000384714 146 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 HMGN2P10-201ENST00000448085 265 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AC010099.1-201ENST00000455434 375 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 RNU6-470P-201ENST00000515954 104 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 RNA5SP384-201ENST00000516615 116 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AC022432.1-201ENST00000595739 310 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AC099778.2-201ENST00000610904 211 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 PART1_1.1-201ENST00000611761 217 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 uc_338.22-201ENST00000622722 187 ntBASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.74□□□□□ -1.81
SMC1BQ8NDV3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU1-70P-201ENST00000362618 164 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU6-283P-201ENST00000364788 107 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU6-336P-201ENST00000364891 107 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU1-100P-201ENST00000365255 165 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 Y_RNA.422-201ENST00000384054 114 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU6-198P-201ENST00000384258 104 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 RNU6-331P-201ENST00000384724 107 ntBASIC3.73□□□□□ -1.81
SMC1BQ8NDV3 MIR196B-201ENST00000384852 84 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms