Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3□□□□□ -1.93
USP38Q8NB14 AC025465.4-201ENST00000513422 638 ntBASIC3□□□□□ -1.93
USP38Q8NB14 SNORA25.11-201ENST00000515935 105 ntBASIC3□□□□□ -1.93
USP38Q8NB14 RNU6-377P-201ENST00000515965 102 ntBASIC3□□□□□ -1.93
USP38Q8NB14 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3□□□□□ -1.93
USP38Q8NB14 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 MIR4648-201ENST00000580107 72 ntBASIC3□□□□□ -1.93
USP38Q8NB14 MIR5692C1-201ENST00000585309 91 ntBASIC3□□□□□ -1.93
USP38Q8NB14 BNIP3P25-201ENST00000596023 559 ntBASIC3□□□□□ -1.93
USP38Q8NB14 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3□□□□□ -1.93
USP38Q8NB14 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 AC097372.5-201ENST00000623665 376 ntBASIC3□□□□□ -1.93
USP38Q8NB14 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3□□□□□ -1.93
USP38Q8NB14 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3□□□□□ -1.93
USP38Q8NB14 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
USP38Q8NB14 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
USP38Q8NB14 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
USP38Q8NB14 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
USP38Q8NB14 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
USP38Q8NB14 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP38Q8NB14 SNORD56.1-201ENST00000362913 68 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 Y_RNA.118-201ENST00000363300 101 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 Y_RNA.157-201ENST00000363638 102 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 SNORD114-30-201ENST00000364448 72 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 RNU6-748P-201ENST00000384648 107 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 SNORD73A-201ENST00000386062 65 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 RNU6-876P-201ENST00000391295 104 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 HMGN2P35-201ENST00000412164 270 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.99□□□□□ -1.93
USP38Q8NB14 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.99□□□□□ -1.93
USP38Q8NB14 AL096701.2-201ENST00000416920 238 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 Z98742.2-201ENST00000431564 187 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC004383.1-201ENST00000438135 289 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP38Q8NB14 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.99□□□□□ -1.93
USP38Q8NB14 RNU7-138P-201ENST00000459479 64 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 RPL31P58-201ENST00000469001 379 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC003982.1-202ENST00000469928 248 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.99□□□□□ -1.93
USP38Q8NB14 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.99□□□□□ -1.93
USP38Q8NB14 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.99□□□□□ -1.93
USP38Q8NB14 CKS1BP2-201ENST00000497342 240 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AIG1P1-201ENST00000503376 148 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC018710.1-201ENST00000506509 158 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AL117351.2-201ENST00000513571 157 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.99□□□□□ -1.93
USP38Q8NB14 SNORA31.6-201ENST00000516241 130 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 SNORA9.3-201ENST00000516383 129 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 RNU6-1332P-201ENST00000516666 104 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AF235103.2-201ENST00000525753 346 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.99□□□□□ -1.93
USP38Q8NB14 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 RBM11P1-201ENST00000604951 799 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC005046.1-201ENST00000608515 625 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 RMST_7.1-201ENST00000621935 268 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 AC009033.1-201ENST00000624279 431 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 CASC19-280ENST00000642102 1351 ntBASIC2.99□□□□□ -1.93
USP38Q8NB14 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.99□□□□□ -1.93
USP38Q8NB14 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
USP38Q8NB14 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
USP38Q8NB14 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP38Q8NB14 AL161431.1-201ENST00000618966 4205 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP38Q8NB14 MIR450B-201ENST00000401182 78 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 SNORD56-201ENST00000413522 71 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC138623.1-201ENST00000418060 216 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.98□□□□□ -1.93
USP38Q8NB14 AL591043.1-201ENST00000432461 424 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 RPL39P40-201ENST00000445481 146 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC008628.2-201ENST00000502605 298 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.98□□□□□ -1.93
USP38Q8NB14 RNU6-358P-201ENST00000516564 75 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 RNU6-1069P-201ENST00000516612 133 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 RPPH1-2P-201ENST00000516688 293 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 RNU6-273P-201ENST00000516937 96 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC087854.1-201ENST00000519706 414 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 ELOCP31-201ENST00000540463 467 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.98□□□□□ -1.93
USP38Q8NB14 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.98□□□□□ -1.93
USP38Q8NB14 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.98□□□□□ -1.93
USP38Q8NB14 MIR3605-201ENST00000583214 100 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC016727.1-205ENST00000605437 569 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
USP38Q8NB14 AL353997.5-201ENST00000618886 171 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 RBBP8P1-201ENST00000449447 1844 ntBASIC2.98□□□□□ -1.93
USP38Q8NB14 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
USP38Q8NB14 Y_RNA.167-201ENST00000363735 109 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 RNU6-827P-201ENST00000365553 106 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP38Q8NB14 RN7SKP223-201ENST00000410582 62 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 RPL30P16-201ENST00000419341 429 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USP38Q8NB14 FABP5P14-201ENST00000437273 393 ntBASIC2.97□□□□□ -1.93
USP38Q8NB14 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.97□□□□□ -1.93
USP38Q8NB14 MRPL50P4-201ENST00000446432 475 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms