Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 WARS2P1-201ENST00000429678 537 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 CCDC34P1-201ENST00000507441 517 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 SNORA43.2-201ENST00000516652 128 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AL512310.1-201ENST00000548639 172 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 MIR5007-201ENST00000583098 95 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC002984.1-201ENST00000591692 448 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC008749.1-201ENST00000597650 306 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-6P-201ENST00000606623 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC103810.6-201ENST00000606708 136 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 Z82243.1-201ENST00000609432 473 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC098679.4-201ENST00000624241 654 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 SCARNA4-202ENST00000625402 129 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AL137790.1-201ENST00000634283 177 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 OR56A5-201ENST00000340110 738 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 SNORD56.1-201ENST00000362913 68 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 SNORD114-19-201ENST00000363072 75 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-843P-201ENST00000384454 104 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 MIR518C-201ENST00000384822 101 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 MIR128-1-201ENST00000384921 82 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 MIR181A1-201ENST00000385026 110 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 SNORA48.2-201ENST00000390926 124 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RNA5SP219-201ENST00000390940 113 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RN7SKP158-201ENST00000410453 326 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-1068P-201ENST00000410958 103 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC003685.2-201ENST00000422795 395 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC063976.3-201ENST00000426849 329 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 MTCO3P38-201ENST00000468910 766 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AF213884.2-201ENST00000510417 903 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 RNU1-97P-201ENST00000516872 164 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AL133241.1-201ENST00000556832 487 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AL162413.1-201ENST00000603198 110 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 APOOP1-201ENST00000604695 592 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AL355297.2-201ENST00000604792 129 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AC097372.5-201ENST00000623665 376 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 AL160394.1-201ENST00000624765 724 ntBASIC1.87□□□□□ -2.11
CCDC71LQ8N9Z2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-529P-201ENST00000363383 104 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-266P-201ENST00000364225 107 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU1-91P-201ENST00000364746 163 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU4-12P-201ENST00000365233 139 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU5E-7P-201ENST00000365290 117 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-38P-201ENST00000384085 107 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.480-201ENST00000384364 102 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MIR196B-201ENST00000384852 84 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-648P-201ENST00000410190 107 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU2-52P-201ENST00000410680 190 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AC008267.5-201ENST00000424928 265 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AIMP1P2-201ENST00000425294 312 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MTCO1P20-201ENST00000425366 358 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 SRIP2-201ENST00000428470 166 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AL365400.1-201ENST00000431854 640 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MTND3P21-201ENST00000433774 331 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MTND1P34-201ENST00000438556 671 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 SEPT14P3-201ENST00000439401 183 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AL732372.2-207ENST00000445840 183 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MTND3P16-201ENST00000452205 344 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 SEPT14P2-201ENST00000453405 183 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-333P-201ENST00000459117 107 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RNU7-167P-201ENST00000459160 62 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RPL30P12-201ENST00000474666 353 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RPL21P99-201ENST00000480369 423 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AC234781.5-201ENST00000508429 271 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 SEPT14P4-201ENST00000513445 186 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 SNORA31.23-201ENST00000517219 133 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 RPL7P20-201ENST00000520308 745 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 FO082796.1-201ENST00000523795 183 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 CR383656.8-201ENST00000549046 145 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 TPRKBP2-201ENST00000565969 475 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MIR4287-201ENST00000579398 78 ntBASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.86□□□□□ -2.11
CCDC71LQ8N9Z2 MIR4424-201ENST00000585257 86 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms