Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 EIF4EP2-201ENST00000422816 654 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 RPL27AP8-201ENST00000424277 446 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 HMGN2P21-201ENST00000447764 270 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AL583843.1-201ENST00000456070 346 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 RPL23AP45-201ENST00000476406 468 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC109329.1-201ENST00000518744 317 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AP005902.1-201ENST00000521358 186 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 OR5D17P-201ENST00000531492 978 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC004584.2-201ENST00000570407 410 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR4425-201ENST00000580572 84 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR4273-201ENST00000582824 84 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC005357.1-201ENST00000588399 301 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AC125232.2-201ENST00000592457 143 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 VN1R91P-201ENST00000594377 169 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR1244-1-201ENST00000612829 85 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR1244-3-201ENST00000635744 85 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR1244-2-201ENST00000636449 85 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 MIR1244-4-202ENST00000636813 85 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 AP001148.1-201ENST00000624124 2359 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 ZNF299P-201ENST00000406845 1804 ntBASIC3.35□□□□□ -1.87
SLC44A3Q8N4M1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-595P-201ENST00000363944 107 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.222-201ENST00000364264 102 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-827P-201ENST00000365553 106 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 RNU6-933P-201ENST00000384424 107 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 Y_RNA.551-201ENST00000384661 102 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 PGBD4P6-201ENST00000421501 610 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AC079354.2-201ENST00000453523 154 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AL160314.1-201ENST00000490836 438 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 MTND1P19-201ENST00000511780 315 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 SNORA70.19-201ENST00000516717 90 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AC090517.1-201ENST00000569307 266 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AL355810.1-201ENST00000614629 552 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AL161629.2-201ENST00000615347 275 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A3Q8N4M1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SLC44A3Q8N4M1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC44A3Q8N4M1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SLC44A3Q8N4M1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AL359693.1-201ENST00000614959 2407 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 RPL9P7-201ENST00000330965 580 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 MIR449A-201ENST00000362113 91 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 SNORA31-201ENST00000362607 130 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 SNORD50.1-201ENST00000362987 71 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-806P-201ENST00000365147 105 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.461-201ENST00000384263 103 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.483-201ENST00000384380 101 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 MIR625-201ENST00000385047 85 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 ARF4P2-201ENST00000430209 526 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AL627311.1-201ENST00000431514 115 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 RPS29P27-201ENST00000463711 170 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 RPL9P9-202ENST00000466501 579 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 KC877373.1-201ENST00000479066 408 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 SNORA25.11-201ENST00000515935 105 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 SNORA70.16-201ENST00000516390 95 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-911P-201ENST00000516523 104 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AC025755.1-201ENST00000521306 278 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 H3F3AP1-201ENST00000559984 334 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 UBL5P2-201ENST00000583788 219 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AC009318.2-201ENST00000610917 651 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 MIR8076-201ENST00000611401 83 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 MTND5P9-201ENST00000503854 1755 ntBASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A3Q8N4M1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 AC007256.1-201ENST00000392253 2765 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.288-201ENST00000364854 92 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-741P-201ENST00000383889 107 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 RNU6-166P-201ENST00000384371 107 ntBASIC3.32□□□□□ -1.88
SLC44A3Q8N4M1 Y_RNA.489-201ENST00000384410 101 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms