Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.184-201ENST00000363884 108 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.263-201ENST00000364659 114 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RNU6-336P-201ENST00000364891 107 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 U8.9-201ENST00000365667 134 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RNU6-95P-201ENST00000384697 107 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AL512633.1-201ENST00000399931 655 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MIR548K-201ENST00000408406 116 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RNU6-293P-201ENST00000411259 106 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MTND1P17-201ENST00000448961 204 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RN7SL499P-201ENST00000481141 276 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MRPS36P2-201ENST00000512569 299 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.691-201ENST00000516611 103 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AP005639.2-201ENST00000527592 928 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MTCO3P13-201ENST00000577757 781 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MIR4672-201ENST00000583126 81 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 BNIP3P16-201ENST00000589779 534 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC023043.3-201ENST00000593113 385 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC078899.3-201ENST00000599065 212 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RPL23AP78-201ENST00000599928 470 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 RPL12P50-201ENST00000603116 116 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 LARP7P1-201ENST00000605576 316 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 AC005046.1-201ENST00000608515 625 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MIR6733-201ENST00000635723 61 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.62□□□□□ -1.99
BEST3Q8N1M1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AL355596.1-201ENST00000565399 3996 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 SNORD56.1-201ENST00000362913 68 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AL030996.1-201ENST00000411430 235 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC074085.1-201ENST00000413598 418 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AL590632.1-201ENST00000424289 371 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC004383.1-201ENST00000438135 289 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 RPL21P2-201ENST00000440049 481 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC107399.1-201ENST00000451226 265 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 MTND1P11-201ENST00000456661 876 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 RNA5SP76-201ENST00000516277 87 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 SNORA31.23-201ENST00000517219 133 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC105029.1-201ENST00000520250 669 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 TRAV32-201ENST00000553993 340 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 MIR4513-201ENST00000581077 86 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC009314.1-201ENST00000603871 304 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC019159.1-201ENST00000605094 187 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.804-201ENST00000615262 101 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC024581.2-201ENST00000619986 252 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AC099654.5-201ENST00000636479 350 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AL161431.1-201ENST00000618966 4205 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.61□□□□□ -1.99
BEST3Q8N1M1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 RPL9P7-201ENST00000330965 580 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 SNORA26.7-201ENST00000391288 122 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 RNA5SP390-201ENST00000410191 113 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AL513043.1-201ENST00000439124 535 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 RPL39P40-201ENST00000445481 146 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 GSTA11P-201ENST00000452866 669 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 U8.21-201ENST00000459536 136 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 RPL9P9-202ENST00000466501 579 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 RPS27P27-201ENST00000498779 255 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 MTND5P5-201ENST00000503764 376 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 SEM1P1-201ENST00000506694 209 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AC096772.1-201ENST00000609146 564 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 MTND4P23-201ENST00000447723 1363 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
BEST3Q8N1M1 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
BEST3Q8N1M1 AC092435.3-201ENST00000565538 3654 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms