Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP48Q86UV5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.28□□□□□ -1.72
USP48Q86UV5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
USP48Q86UV5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP48Q86UV5 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.27□□□□□ -1.73
USP48Q86UV5 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.27□□□□□ -1.73
USP48Q86UV5 TNPO1P3-201ENST00000436471 2662 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 Y_RNA.123-201ENST00000363338 102 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 RNA5SP42-201ENST00000364278 115 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 MIR1183-201ENST00000408856 89 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC007098.1-201ENST00000420122 367 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC4.27□□□□□ -1.73
USP48Q86UV5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.27□□□□□ -1.73
USP48Q86UV5 AC079354.2-201ENST00000453523 154 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.27□□□□□ -1.73
USP48Q86UV5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP48Q86UV5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP48Q86UV5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.27□□□□□ -1.73
USP48Q86UV5 CR383656.8-201ENST00000549046 145 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 HSBP1P1-201ENST00000555205 166 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC021739.1-201ENST00000559631 174 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 MIR5701-3-201ENST00000578890 82 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 MIR5701-1-201ENST00000585138 82 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 MIR5701-2-201ENST00000615634 82 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC068831.7-201ENST00000616954 363 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC097372.5-201ENST00000623665 376 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC241585.2-209ENST00000638217 143 ntBASIC4.27□□□□□ -1.73
USP48Q86UV5 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.27□□□□□ -1.73
USP48Q86UV5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP48Q86UV5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP48Q86UV5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
USP48Q86UV5 RNU6-858P-201ENST00000362436 107 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 Y_RNA.307-201ENST00000365022 117 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 MIR184-201ENST00000384962 84 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP48Q86UV5 FTH1P15-201ENST00000406984 280 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP48Q86UV5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.26□□□□□ -1.73
USP48Q86UV5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.26□□□□□ -1.73
USP48Q86UV5 U3.44-201ENST00000458938 192 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 S100A11P2-201ENST00000467589 312 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.26□□□□□ -1.73
USP48Q86UV5 MRPL42P6-201ENST00000486397 371 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 RPL22P13-201ENST00000493291 347 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 AC093663.1-201ENST00000497190 394 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 HMGN2P15-201ENST00000585707 270 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
USP48Q86UV5 AL021879.1-201ENST00000611756 288 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 RNVU1-4-201ENST00000612985 164 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 AC024581.2-201ENST00000619986 252 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.26□□□□□ -1.73
USP48Q86UV5 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP48Q86UV5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP48Q86UV5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.26□□□□□ -1.73
USP48Q86UV5 AP001486.2-201ENST00000561652 5113 ntBASIC4.26□□□□□ -1.73
USP48Q86UV5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.25□□□□□ -1.73
USP48Q86UV5 RNU4-42P-201ENST00000364738 142 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 Y_RNA.396-201ENST00000383949 103 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 RNU6-472P-201ENST00000384299 107 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 COTL1P1-201ENST00000422309 375 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 AC092423.1-201ENST00000430165 186 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 Z98949.2-201ENST00000440996 144 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 SSXP4-201ENST00000451349 245 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 PCNPP5-201ENST00000452246 481 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 RPL30P10-201ENST00000488148 337 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.25□□□□□ -1.73
USP48Q86UV5 RNU6-581P-201ENST00000516214 105 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 AC144568.1-201ENST00000520139 137 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 NDUFB9P3-201ENST00000521269 501 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 AP000867.2-201ENST00000532468 320 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.25□□□□□ -1.73
USP48Q86UV5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.25□□□□□ -1.73
USP48Q86UV5 MIR5680-201ENST00000577577 84 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 MIR4425-201ENST00000580572 84 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 AL162274.2-201ENST00000614406 332 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 U2.1-201ENST00000618978 145 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 MIR4272-201ENST00000635924 64 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 MIR3199-2-201ENST00000636243 86 ntBASIC4.25□□□□□ -1.73
USP48Q86UV5 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP48Q86UV5 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP48Q86UV5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP48Q86UV5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
USP48Q86UV5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP48Q86UV5 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.24□□□□□ -1.73
USP48Q86UV5 Y_RNA.424-201ENST00000384063 103 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 Y_RNA.556-201ENST00000384677 113 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 RPL21P1-201ENST00000399532 476 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 RNU6-101P-201ENST00000410323 104 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP48Q86UV5 SETP5-201ENST00000437270 562 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 HMGN2P20-201ENST00000437531 273 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 AC010099.1-201ENST00000455434 375 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 RN7SKP210-201ENST00000459176 261 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.24□□□□□ -1.73
USP48Q86UV5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.24□□□□□ -1.73
USP48Q86UV5 SNORA70.14-201ENST00000516205 110 ntBASIC4.24□□□□□ -1.73
USP48Q86UV5 RNU6-388P-201ENST00000517012 105 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms