Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC007375.1-201ENST00000554513 578 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 MIR4419B-201ENST00000577260 68 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 MIR3683-201ENST00000580847 82 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC091135.1-201ENST00000585943 307 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 HMGN1P30-201ENST00000589286 268 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC023043.2-201ENST00000589678 1026 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
SCXQ7RTU7 AL022345.1-201ENST00000607292 135 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC016597.2-201ENST00000613256 341 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC026585.1-201ENST00000619582 524 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.13□□□□□ -2.23
SCXQ7RTU7 AC099654.13-201ENST00000639774 207 ntBASIC1.13□□□□□ -2.23
SCXQ7RTU7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 RNU6-78P-201ENST00000362897 107 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 U8.3-201ENST00000363321 132 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 SNORA62.1-201ENST00000364287 154 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 RNU5E-5P-201ENST00000365379 116 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 RNU6-439P-201ENST00000384188 106 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 RNU2-8P-201ENST00000410727 190 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 RPL21P90-201ENST00000415692 466 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 CALM2P2-201ENST00000428512 440 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 RNU6-333P-201ENST00000459117 107 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC005908.1-201ENST00000468701 347 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC114801.2-201ENST00000503825 781 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 RBBP4P6-201ENST00000508098 202 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 Y_RNA.672-201ENST00000516289 104 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 SNORA44.1-201ENST00000517031 108 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC022616.3-201ENST00000523940 148 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 COPS8P3-201ENST00000526024 482 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC137800.2-201ENST00000574375 120 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC078795.2-201ENST00000602835 1252 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC022022.2-201ENST00000602989 360 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC112191.3-201ENST00000604371 277 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 MIR502-201ENST00000606349 86 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 AC027807.2-201ENST00000616099 408 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 ZNF680P1-201ENST00000436625 1469 ntBASIC1.12□□□□□ -2.23
SCXQ7RTU7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 CBX3P1-201ENST00000325243 554 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 MIR378A-201ENST00000362177 66 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 snoU2_19.1-201ENST00000362361 80 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6-1214P-201ENST00000363650 109 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6-457P-201ENST00000363999 107 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6-743P-201ENST00000364151 106 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6-641P-201ENST00000384006 107 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6-1222P-201ENST00000384615 107 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 SNORA48.1-201ENST00000390879 135 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 FGF7P8-201ENST00000402994 292 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 Y_RNA.597-201ENST00000410463 100 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNA5SP100-201ENST00000410903 110 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNA5SP59-201ENST00000410922 110 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNU6-607P-201ENST00000411283 108 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 RPL39P29-201ENST00000447779 157 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 USP9YP12-201ENST00000450481 570 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RPL30P12-201ENST00000474666 353 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 MTND2P33-201ENST00000506452 1031 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC093259.1-201ENST00000509755 300 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 RNVU1-2-201ENST00000516326 135 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.11□□□□□ -2.23
SCXQ7RTU7 VN1R80P-201ENST00000597126 338 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC131159.1-201ENST00000621854 213 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC138649.3-201ENST00000622154 254 ntBASIC1.11□□□□□ -2.23
SCXQ7RTU7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SCXQ7RTU7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SCXQ7RTU7 RNU2-3P-201ENST00000410144 191 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 RNA5SP111-201ENST00000411386 101 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.1□□□□□ -2.23
SCXQ7RTU7 AL645568.3-201ENST00000433683 316 ntBASIC1.1□□□□□ -2.23
SCXQ7RTU7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms