Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC009487.2-201ENST00000420969 6821 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-227P-201ENST00000362865 103 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 Y_RNA.473-201ENST00000384333 102 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 RPL37P10-201ENST00000412884 288 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 NCOR1P3-201ENST00000420479 303 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AIMP1P2-201ENST00000425294 312 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 USP9YP30-201ENST00000430729 455 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 PCMTD1P1-201ENST00000455560 355 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 SNORD5.1-201ENST00000458800 75 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 U8.21-201ENST00000459536 136 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 RNU2-53P-201ENST00000516257 147 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC007536.1-201ENST00000533382 349 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 C8orf59P2-201ENST00000603441 271 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 MIR7851-201ENST00000610611 160 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC063943.3-201ENST00000615562 356 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AC098657.3-201ENST00000620434 263 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 AL450472.1-202ENST00000637286 180 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 MIR1302-1-201ENST00000637932 143 ntBASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PPP4R4Q6NUP7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 Y_RNA.356-201ENST00000365475 113 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-842P-201ENST00000384269 107 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-443P-201ENST00000384780 107 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNA5SP44-201ENST00000410446 133 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 DAP3P1-201ENST00000441522 278 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC093019.1-201ENST00000443135 252 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC073901.1-201ENST00000462471 408 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL121594.1-201ENST00000475906 575 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC090096.1-201ENST00000489168 390 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1016P-201ENST00000516689 94 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL355375.2-201ENST00000574825 175 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL713866.2-201ENST00000603579 219 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC018462.2-201ENST00000605375 395 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC019193.3-201ENST00000609144 554 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 MIR8076-201ENST00000611401 83 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AL359697.1-201ENST00000624879 587 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 AC093831.2-201ENST00000624393 3427 ntBASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PPP4R4Q6NUP7 RNA5SP119-201ENST00000362715 117 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-655P-201ENST00000362858 107 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1210P-201ENST00000363775 107 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 SNORA51.4-201ENST00000364993 124 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 AC090515.1-201ENST00000465295 476 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 AC140059.1-201ENST00000489238 361 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 MTND3P22-201ENST00000510932 243 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 AC011494.1-201ENST00000596454 237 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 RPL30P11-203ENST00000598995 310 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 AL356157.2-201ENST00000605122 111 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 RPL23AP88-201ENST00000605759 454 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 MIR5739-201ENST00000619803 80 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 AC104985.2-201ENST00000620598 500 ntBASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.17□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-212P-201ENST00000362642 104 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 SNORD50.1-201ENST00000362987 71 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNU4-73P-201ENST00000363164 141 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-1141P-201ENST00000364520 107 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-593P-201ENST00000364716 112 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNA5SP125-201ENST00000364843 120 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 Y_RNA.482-201ENST00000384377 111 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 Y_RNA.509-201ENST00000384506 99 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNU6-601P-201ENST00000384540 107 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 MIR95-201ENST00000385072 81 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 CBX3P9-201ENST00000402326 552 ntBASIC3.16□□□□□ -1.9
PPP4R4Q6NUP7 RNA5SP344-201ENST00000411081 104 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms