Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC092268.1-201ENST00000342691 405 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 RNU6-655P-201ENST00000362858 107 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 RNA5SP197-201ENST00000363357 119 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.404-201ENST00000383978 102 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.504-201ENST00000384481 104 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 RNY4P36-201ENST00000391116 96 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 EIF4EP4-201ENST00000424916 578 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 USMG5P1-201ENST00000425964 177 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC018644.1-201ENST00000429934 551 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 RPL30P1-201ENST00000488676 339 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AIG1P1-201ENST00000503376 148 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 RNU6-307P-201ENST00000516743 106 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC026403.1-201ENST00000518938 295 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC016256.1-201ENST00000547971 354 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC005899.2-201ENST00000584353 90 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC006130.2-201ENST00000586202 326 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AL157817.1-201ENST00000614264 790 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC133104.2-201ENST00000615272 193 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 AC084781.2-201ENST00000615568 161 ntBASIC3.1□□□□□ -1.91
RNF220Q5VTB9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF220Q5VTB9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF220Q5VTB9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF220Q5VTB9 RNU4-35P-201ENST00000362588 141 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 SNORD50.1-201ENST00000362987 71 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 Y_RNA.431-201ENST00000384086 102 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 SNORD116-29-201ENST00000384516 83 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 RPS15AP7-201ENST00000439294 405 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 GPM6BP3-201ENST00000442797 145 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 RPL30P15-201ENST00000457129 321 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
RNF220Q5VTB9 FO393415.2-201ENST00000480085 343 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AC022447.4-201ENST00000504053 364 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AC097473.1-201ENST00000508142 408 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF220Q5VTB9 RNU2-53P-201ENST00000516257 147 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 RNU6-1213P-201ENST00000517075 94 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AC027176.1-201ENST00000560204 514 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 MIR3199-1-201ENST00000582434 88 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AC009318.2-201ENST00000610917 651 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AL359198.2-201ENST00000611836 194 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 AC039056.2-201ENST00000622261 511 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 MTND5P9-201ENST00000503854 1755 ntBASIC3.09□□□□□ -1.91
RNF220Q5VTB9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.92
RNF220Q5VTB9 Z83843.1-201ENST00000604070 3685 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.11-201ENST00000362375 109 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.535-201ENST00000384612 99 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 RNU6-310P-201ENST00000384655 107 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MIR554-201ENST00000384874 96 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MIR887-201ENST00000401258 79 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 U6atac.2-201ENST00000408644 118 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AIMP1P2-201ENST00000425294 312 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MTND4P28-201ENST00000426217 387 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AL513124.1-201ENST00000450410 614 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 CYCSP35-201ENST00000451978 304 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 IGKV2-26-201ENST00000518305 343 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MIR5696-201ENST00000578474 85 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MIR3136-201ENST00000583498 78 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AL034408.1-202ENST00000636088 415 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 AC080128.1-201ENST00000474389 1917 ntBASIC3.08□□□□□ -1.92
RNF220Q5VTB9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF220Q5VTB9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AC026241.1-201ENST00000517873 2142 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RNU6-968P-201ENST00000384076 107 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 MIR218-1-201ENST00000384999 110 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 MIR218-2-201ENST00000385006 110 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 RN7SKP220-201ENST00000410611 288 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.646-201ENST00000410980 101 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.07□□□□□ -1.92
RNF220Q5VTB9 AL590135.1-201ENST00000422215 156 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms