Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-233P-201ENST00000410845 141 ntBASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 AC138623.1-201ENST00000418060 216 ntBASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 AL353777.1-201ENST00000425552 326 ntBASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 SNORA70.16-201ENST00000516390 95 ntBASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 RNU6-943P-201ENST00000516960 98 ntBASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 AC091304.9-201ENST00000612091 226 ntBASIC-0.22□□□□□ -2.45
VPS13DQ5THJ4 SNORD114-5-201ENST00000362928 70 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 RNY1P8-201ENST00000383970 114 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 MIR196A2-201ENST00000385189 110 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 RNU6-952P-201ENST00000391164 108 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 GTF2IP3-201ENST00000433887 494 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 RAB11AP1-201ENST00000442978 646 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 HMGB1P33-201ENST00000563485 527 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 RNY1P9-201ENST00000532431 109 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 MIR3664-201ENST00000579074 99 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC084824.4-201ENST00000620106 731 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC092634.7-201ENST00000621022 103 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AP000943.4-201ENST00000622912 357 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC092447.10-201ENST00000620607 1652 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 RNU2-21P-201ENST00000410368 188 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC006548.1-201ENST00000427470 102 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC026271.5-201ENST00000577873 130 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 BNIP3P23-201ENST00000599655 511 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 CR381572.1-201ENST00000625098 102 ntBASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.23□□□□□ -2.45
VPS13DQ5THJ4 MTCYBP29-201ENST00000436327 1006 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC055764.2-201ENST00000610089 670 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 SNORD115-41-201ENST00000363608 82 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.493-201ENST00000384422 102 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 SNORA48.1-201ENST00000390879 135 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 SSR1P1-201ENST00000407630 814 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC091874.1-201ENST00000511402 339 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 NAMPTP3-201ENST00000569273 224 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC055876.5-201ENST00000605667 259 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC040896.1-201ENST00000613819 479 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 RNU6-969P-201ENST00000383900 105 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 MIR643-201ENST00000385267 97 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 MRPS17P3-201ENST00000465453 385 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 RNU6-319P-201ENST00000516025 108 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 HAUS1P3-201ENST00000523909 662 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC007751.1-201ENST00000529260 376 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 MIR5094-201ENST00000578766 85 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC004908.3-201ENST00000610248 625 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AL355073.2-201ENST00000612106 557 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 MIR412-201ENST00000362142 91 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 SNORA25B-201ENST00000365507 128 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AP000797.1-201ENST00000478870 387 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 RNVU1-2-201ENST00000516326 135 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 RN7SKP258-201ENST00000517151 304 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AP003392.2-201ENST00000527269 208 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AL157871.3-201ENST00000557231 293 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AC112187.2-201ENST00000604345 283 ntBASIC-0.24□□□□□ -2.45
VPS13DQ5THJ4 AL049737.1-201ENST00000413920 1403 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 RNU6-46P-201ENST00000383860 107 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 SNORA75.6-201ENST00000391318 127 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 MTCO2P8-201ENST00000412213 658 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 SNX3P1X-201ENST00000414887 175 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AP000860.1-201ENST00000605250 559 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AL138713.1-201ENST00000624026 2130 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 RNU2-49P-201ENST00000410666 184 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 SNRPEP9-201ENST00000436794 238 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 BRK1P2-201ENST00000442875 223 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 TRBV8-1-201ENST00000481590 279 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AL353778.1-201ENST00000603149 408 ntBASIC-0.25□□□□□ -2.45
VPS13DQ5THJ4 AL357312.1-201ENST00000603879 298 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms