Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORA64.4-201ENST00000516632 81 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RNU1-54P-201ENST00000517181 120 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AL117187.1-201ENST00000555482 181 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC006006.1-201ENST00000603082 144 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC006157.1-201ENST00000611750 366 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 RN7SL853P-201ENST00000617250 223 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC018692.3-201ENST00000623929 123 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 AC138305.3-201ENST00000624988 240 ntBASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
SLC44A4Q53GD3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.158-201ENST00000363651 101 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 RNU6-827P-201ENST00000365553 106 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 RNU6-1032P-201ENST00000384100 107 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC023141.4-201ENST00000412031 328 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 Z99755.1-201ENST00000414048 380 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 USP9YP30-201ENST00000430729 455 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC107083.1-201ENST00000439643 279 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC026801.1-201ENST00000497178 464 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 RNU6-699P-201ENST00000517081 110 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC008269.2-201ENST00000561915 1105 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC010653.1-201ENST00000571108 881 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 MIR4474-201ENST00000579189 78 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 AC087588.2-201ENST00000617667 426 ntBASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.37□□□□□ -1.87
SLC44A4Q53GD3 FAM35CP-201ENST00000554755 2470 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC110491.1-201ENST00000562191 2010 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-78P-201ENST00000362897 107 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-428P-201ENST00000362942 107 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNY1P14-201ENST00000384426 108 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-505P-201ENST00000384427 107 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.496-201ENST00000384444 101 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 U3.37-201ENST00000408528 213 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU2-49P-201ENST00000410666 184 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 MTCYBP10-201ENST00000424905 650 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 HMGN2P10-201ENST00000448085 265 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC128713.1-201ENST00000471495 306 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 SNORA25.10-201ENST00000515926 124 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-470P-201ENST00000515954 104 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-764P-201ENST00000516396 105 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RNU6-711P-201ENST00000517255 106 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC103996.1-201ENST00000555468 102 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RPL12P50-201ENST00000603116 116 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC006023.1-201ENST00000603944 259 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 MIR6134-201ENST00000617606 109 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 ADAM3A-203ENST00000461344 2157 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 CDC27P3-201ENST00000635418 1910 ntBASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.36□□□□□ -1.87
SLC44A4Q53GD3 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 RNU1-100P-201ENST00000365255 165 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.364-201ENST00000365532 101 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 Y_RNA.557-201ENST00000384680 107 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 SNORA75.6-201ENST00000391318 127 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AL031121.1-201ENST00000406553 254 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 MIR548F4-201ENST00000408515 105 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AL117339.3-201ENST00000418733 162 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 RPS15AP5-201ENST00000436276 388 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 GSTA11P-201ENST00000452866 669 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC113155.1-201ENST00000511141 769 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC006199.1-201ENST00000548728 219 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 TRAV32-201ENST00000553993 340 ntBASIC3.35□□□□□ -1.87
SLC44A4Q53GD3 AC005476.1-201ENST00000554427 397 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms