Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 SNORA75-201ENST00000384158 137 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 DEFB108C-201ENST00000400154 252 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 MRPL42P2-201ENST00000403169 426 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 Y_RNA.598-201ENST00000410480 95 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 RNA5SP489-201ENST00000410986 109 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AL030996.1-201ENST00000411430 235 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC127391.1-201ENST00000411737 98 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 HMGN1P14-201ENST00000412459 517 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 CDK8P2-201ENST00000415020 547 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 ELOCP4-201ENST00000420090 333 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.8□□□□□ -2.12
SF3A2Q15428 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.8□□□□□ -2.12
SF3A2Q15428 RPL23AP30-201ENST00000432419 501 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 MTCO3P5-201ENST00000433620 714 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC104850.1-201ENST00000435940 476 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 HMGB1P31-201ENST00000437242 427 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.8□□□□□ -2.12
SF3A2Q15428 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
SF3A2Q15428 MTND1P12-201ENST00000455231 147 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 SNRPFP4-201ENST00000456366 242 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.8□□□□□ -2.12
SF3A2Q15428 AC117503.1-201ENST00000472241 394 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 ARL2BPP4-201ENST00000506854 471 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.8□□□□□ -2.12
SF3A2Q15428 RNU2-46P-201ENST00000517038 113 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC107953.1-201ENST00000522216 297 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.8□□□□□ -2.12
SF3A2Q15428 AC022878.1-201ENST00000530684 149 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 RPL21P5-201ENST00000554662 472 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 PSMA3P-201ENST00000555485 635 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.8□□□□□ -2.12
SF3A2Q15428 AC005771.1-201ENST00000585581 349 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC146944.4-201ENST00000602697 718 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AC087045.1-201ENST00000605856 382 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 AL603839.4-201ENST00000624658 1005 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SF3A2Q15428 SNORD3E-201ENST00000362899 217 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 RNY4P34-201ENST00000364779 95 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 SNORA25B-201ENST00000365507 128 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 RNU6-1119P-201ENST00000384349 108 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 RNU6-348P-201ENST00000384386 107 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 SNORA40.3-201ENST00000390964 122 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 MIR1294-201ENST00000408503 142 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 MTCO3P41-201ENST00000414801 328 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AL031667.1-201ENST00000440222 725 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AL022238.1-201ENST00000442557 355 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC003071.1-201ENST00000451219 789 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 snoU109.2-201ENST00000459316 135 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 SNORD42A-201ENST00000459584 64 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 MED28P2-201ENST00000475771 317 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC018868.1-201ENST00000491307 315 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.79□□□□□ -2.12
SF3A2Q15428 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SF3A2Q15428 RNU7-51P-201ENST00000516560 62 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 SNORA48.11-201ENST00000517015 89 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AC011979.2-201ENST00000527568 352 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AP002453.2-201ENST00000533503 320 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AC136619.2-201ENST00000563361 631 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC092325.1-201ENST00000566449 554 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AGGF1P4-201ENST00000568249 801 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 MIR4529-201ENST00000578110 78 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AL031274.2-201ENST00000599419 203 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC174048.1-201ENST00000603389 144 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 SEPT7P9-203ENST00000604116 343 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC012557.2-201ENST00000605919 418 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AL139286.2-201ENST00000606838 396 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AP002360.4-201ENST00000606980 481 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC093788.1-201ENST00000609356 927 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.79□□□□□ -2.12
SF3A2Q15428 AL512598.1-201ENST00000610158 273 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC024940.5-201ENST00000622889 474 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 AC098679.4-201ENST00000624241 654 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 RBBP8P1-201ENST00000449447 1844 ntBASIC1.79□□□□□ -2.12
SF3A2Q15428 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
SF3A2Q15428 AC008555.8-201ENST00000623602 2168 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 Y_RNA.327-201ENST00000365201 102 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 RNU6-297P-201ENST00000384636 107 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 HMGN2P39-201ENST00000398005 273 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 MIR1276-201ENST00000408707 83 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.78□□□□□ -2.12
SF3A2Q15428 AL663109.1-201ENST00000411498 844 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.78□□□□□ -2.12
SF3A2Q15428 AL358453.1-201ENST00000422522 250 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 CALM2P2-201ENST00000428512 440 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.78□□□□□ -2.12
SF3A2Q15428 RPS24P1-201ENST00000438550 371 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.78□□□□□ -2.12
SF3A2Q15428 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.78□□□□□ -2.12
SF3A2Q15428 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms