Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 SNORA40C-201ENST00000391285 128 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 U3.39-201ENST00000408569 239 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXF2Q12947 MTCO3P29-201ENST00000432119 779 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXF2Q12947 HIGD1AP2-201ENST00000446367 280 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 Y_RNA.644-201ENST00000459006 113 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 snoU109.2-201ENST00000459316 135 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 RPL31P13-201ENST00000484151 370 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 RPL21P13-201ENST00000488305 481 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 RPS23P5-201ENST00000495419 428 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 AK3P2-201ENST00000507976 429 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
FOXF2Q12947 Y_RNA.674-201ENST00000516362 113 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 Y_RNA.703-201ENST00000516846 111 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 RNU6-255P-201ENST00000516957 105 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 ATP5F1P5-201ENST00000526403 760 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
FOXF2Q12947 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXF2Q12947 ZNF192P1-203ENST00000565888 810 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 MIR5195-201ENST00000583555 115 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXF2Q12947 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXF2Q12947 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
FOXF2Q12947 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXF2Q12947 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
FOXF2Q12947 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF2Q12947 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF2Q12947 USP8P1-201ENST00000494673 3183 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXF2Q12947 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
FOXF2Q12947 Y_RNA.143-201ENST00000363520 106 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 SNORA7.2-201ENST00000364446 145 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 SNORD6-201ENST00000365444 73 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
FOXF2Q12947 RPL21P75-201ENST00000396599 483 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 MIR190B-201ENST00000401119 79 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RPL21P28-201ENST00000401418 483 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RPS29P13-201ENST00000402041 169 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 MTCYBP2-201ENST00000407745 171 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RNA5SP120-201ENST00000410900 112 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AL590556.1-201ENST00000423231 483 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AL606753.1-201ENST00000427435 87 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 TOMM20P4-201ENST00000427861 435 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC005326.1-201ENST00000429197 123 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AL591043.1-201ENST00000432461 424 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF2Q12947 RPL23AP22-201ENST00000437556 453 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AL136097.1-201ENST00000456945 913 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC092798.1-201ENST00000458542 409 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RN7SKP210-201ENST00000459176 261 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RNU7-87P-201ENST00000459343 62 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF2Q12947 RPL21P39-201ENST00000463605 483 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 SNRPGP3-201ENST00000469405 227 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RPL32P34-201ENST00000486380 400 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC132942.1-201ENST00000486753 483 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC093591.1-201ENST00000491435 481 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 RPL21P16-201ENST00000495531 483 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC093663.1-201ENST00000497190 394 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXF2Q12947 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXF2Q12947 AC010620.2-201ENST00000600135 313 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 AC048347.1-201ENST00000624621 427 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXF2Q12947 MIR3651-201ENST00000630427 90 ntBASIC3.07□□□□□ -1.92
FOXF2Q12947 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF2Q12947 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
FOXF2Q12947 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF2Q12947 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXF2Q12947 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
FOXF2Q12947 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF2Q12947 Y_RNA.541-201ENST00000384640 113 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 MIR483-201ENST00000385070 76 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 SNORA12.2-201ENST00000391040 156 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 MIR1290-201ENST00000408735 78 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 AL445305.1-201ENST00000432577 575 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF2Q12947 AC079354.2-201ENST00000453523 154 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 RN7SL594P-201ENST00000470590 287 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXF2Q12947 SERF1AP1-201ENST00000514575 187 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 SNORA74D-201ENST00000516404 141 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 RNU6-612P-201ENST00000516909 102 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 RNU6-1212P-201ENST00000517023 104 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.06□□□□□ -1.92
FOXF2Q12947 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF2Q12947 TRAV28-201ENST00000557548 323 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 MIR4643-201ENST00000577473 78 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.06□□□□□ -1.92
FOXF2Q12947 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF2Q12947 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF2Q12947 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF2Q12947 AF127577.6-201ENST00000623352 2191 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.06□□□□□ -1.92
FOXF2Q12947 AC132825.6-201ENST00000638861 357 ntBASIC3.06□□□□□ -1.92
FOXF2Q12947 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXF2Q12947 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms