Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR3690-201ENST00000580266 75 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC090897.2-201ENST00000581715 130 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH1Q08174 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH1Q08174 AC068831.7-201ENST00000616954 363 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDH1Q08174 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
PCDH1Q08174 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH1Q08174 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH1Q08174 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH1Q08174 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDH1Q08174 AC126755.2-208ENST00000327792 462 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 AC138969.1-213ENST00000331436 462 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 Y_RNA.179-201ENST00000363844 90 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 RNU6-487P-201ENST00000365430 104 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 RNA5SP167-201ENST00000365461 116 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 RPL18P10-201ENST00000425606 538 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDH1Q08174 AC011276.1-201ENST00000469688 323 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 AC084357.1-201ENST00000473404 255 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 RPL30P12-201ENST00000474666 353 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 AC011602.1-201ENST00000546484 331 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 AC018448.1-201ENST00000552843 316 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 PARP1P2-201ENST00000556806 195 ntBASIC4.07□□□□□ -1.76
PCDH1Q08174 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH1Q08174 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDH1Q08174 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PCDH1Q08174 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PCDH1Q08174 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH1Q08174 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH1Q08174 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH1Q08174 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH1Q08174 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH1Q08174 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDH1Q08174 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDH1Q08174 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDH1Q08174 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 AC007656.2-201ENST00000624902 4547 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDH1Q08174 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 RNU1-132P-201ENST00000364300 164 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 SNORA70.2-201ENST00000364506 135 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 Y_RNA.398-201ENST00000383952 99 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 RNU6-622P-201ENST00000384272 103 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 U3.22-201ENST00000391120 215 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 RNA5SP239-201ENST00000410218 129 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 RNU6-1135P-201ENST00000411083 103 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 YPEL5P1-201ENST00000419731 367 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 AC099548.1-201ENST00000421443 426 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 BPY2DP-201ENST00000422208 265 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 OOSP1P1-201ENST00000423265 274 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 AC019205.3-201ENST00000424573 156 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 AC024067.1-201ENST00000426199 223 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 HMGB1P37-201ENST00000439613 609 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH1Q08174 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDH1Q08174 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDH1Q08174 AC099522.1-202ENST00000514718 367 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 RNU6-966P-201ENST00000516479 104 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 ACA59.2-201ENST00000517061 156 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.06□□□□□ -1.76
PCDH1Q08174 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.06□□□□□ -1.76
PCDH1Q08174 AP001485.1-201ENST00000604799 199 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 AC016588.2-201ENST00000632484 3021 ntBASIC4.06□□□□□ -1.76
PCDH1Q08174 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDH1Q08174 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH1Q08174 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDH1Q08174 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDH1Q08174 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
PCDH1Q08174 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH1Q08174 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH1Q08174 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDH1Q08174 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH1Q08174 RBBP8P1-201ENST00000449447 1844 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PCDH1Q08174 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDH1Q08174 RNU4-80P-201ENST00000363200 141 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 RNU6-270P-201ENST00000364131 105 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 RNA5SP366-201ENST00000365454 123 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 SNORA37-201ENST00000384504 129 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 RN7SKP177-201ENST00000410567 355 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 HSPE1P12-201ENST00000412576 301 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH1Q08174 AC007215.1-201ENST00000464893 276 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH1Q08174 SNORA31.16-201ENST00000516773 139 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 AP004242.1-201ENST00000533701 349 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 AC006199.1-201ENST00000548728 219 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDH1Q08174 AC108706.1-201ENST00000611053 297 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 AC092628.2-201ENST00000622492 339 ntBASIC4.05□□□□□ -1.76
PCDH1Q08174 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDH1Q08174 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms