Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC090772.4-201ENST00000623599 362 ntBASIC-0.51□□□□□ -2.49
TFF3Q07654 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 SNORD99-201ENST00000408612 74 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 AC127391.1-201ENST00000411737 98 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.52□□□□□ -2.49
TFF3Q07654 RAB28P5-201ENST00000427490 651 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.52□□□□□ -2.49
TFF3Q07654 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.52□□□□□ -2.49
TFF3Q07654 SNORA31.2-201ENST00000516019 134 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 ROCK1P1-201ENST00000573767 549 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 AC025627.3-201ENST00000582078 182 ntBASIC-0.52□□□□□ -2.49
TFF3Q07654 MIR409-201ENST00000362237 79 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 RNU6-244P-201ENST00000391028 104 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.53□□□□□ -2.49
TFF3Q07654 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.53□□□□□ -2.49
TFF3Q07654 AC114811.1-201ENST00000507207 168 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 AC116347.2-201ENST00000514912 523 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 AC012213.4-201ENST00000606457 354 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 MIR548AZ-201ENST00000616567 95 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 7SK.10-201ENST00000621414 298 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 AC008993.2-201ENST00000631744 806 ntBASIC-0.53□□□□□ -2.49
TFF3Q07654 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
TFF3Q07654 RNA5SP331-201ENST00000364986 107 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 RNU6-43P-201ENST00000384302 107 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 MIR194-1-201ENST00000384892 85 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.54□□□□□ -2.5
TFF3Q07654 Z82210.1-201ENST00000440037 231 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.54□□□□□ -2.5
TFF3Q07654 MAL2-206ENST00000522187 547 ntTSL 4 BASIC-0.54□□□□□ -2.5
TFF3Q07654 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.54□□□□□ -2.5
TFF3Q07654 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.54□□□□□ -2.5
TFF3Q07654 MIR548AX-201ENST00000580117 73 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.54□□□□□ -2.5
TFF3Q07654 AC021506.2-201ENST00000612354 169 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 AC073968.1-201ENST00000618594 637 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.54□□□□□ -2.5
TFF3Q07654 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.54□□□□□ -2.5
TFF3Q07654 AC092268.1-201ENST00000342691 405 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.55□□□□□ -2.5
TFF3Q07654 MTND4LP10-201ENST00000435146 291 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 RPS15AP9-201ENST00000439856 381 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.55□□□□□ -2.5
TFF3Q07654 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.55□□□□□ -2.5
TFF3Q07654 SNORA40.12-201ENST00000516329 111 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 AC007751.1-201ENST00000529260 376 ntBASIC-0.55□□□□□ -2.5
TFF3Q07654 RNU6-730P-201ENST00000383954 104 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 RNU6-48P-201ENST00000384161 107 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 SNORA32.3-201ENST00000384772 121 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 MIR106A-201ENST00000384870 81 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 SNORA16.2-201ENST00000390991 127 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 AF228730.1-201ENST00000397972 663 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.56□□□□□ -2.5
TFF3Q07654 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.56□□□□□ -2.5
TFF3Q07654 RPS3AP17-201ENST00000472594 777 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 AC114981.1-201ENST00000503897 678 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 RNU6-889P-201ENST00000517189 103 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.56□□□□□ -2.5
TFF3Q07654 AC023157.2-201ENST00000540596 141 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 AC010615.3-201ENST00000597319 394 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 AC011939.3-201ENST00000613686 466 ntBASIC-0.56□□□□□ -2.5
TFF3Q07654 MTND4P8-201ENST00000514997 1362 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 MIR140-201ENST00000385282 100 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.57□□□□□ -2.5
TFF3Q07654 AC005094.1-201ENST00000440420 368 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-0.57□□□□□ -2.5
TFF3Q07654 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.57□□□□□ -2.5
TFF3Q07654 snoU13.11-201ENST00000459219 104 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.57□□□□□ -2.5
TFF3Q07654 AC104982.1-201ENST00000478775 574 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 RPF2P2-201ENST00000504693 896 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.57□□□□□ -2.5
TFF3Q07654 AL022067.1-201ENST00000602426 454 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AP002906.1-201ENST00000603405 233 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AC025588.3-201ENST00000604182 274 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AC104408.1-201ENST00000605241 170 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AC084824.4-201ENST00000620106 731 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 AC078938.1-201ENST00000620993 318 ntBASIC-0.57□□□□□ -2.5
TFF3Q07654 SNORD114-5-201ENST00000362928 70 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
TFF3Q07654 RNU6-952P-201ENST00000391164 108 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.58□□□□□ -2.5
TFF3Q07654 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.58□□□□□ -2.5
TFF3Q07654 AC024082.2-201ENST00000434771 238 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 MTND4P19-201ENST00000446659 478 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 AP001324.2-201ENST00000461163 319 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 AC096720.1-201ENST00000604441 183 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 FTX_3.1-201ENST00000610451 147 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 AC006213.4-201ENST00000616184 634 ntBASIC-0.58□□□□□ -2.5
TFF3Q07654 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.58□□□□□ -2.5
TFF3Q07654 SNORA80D-201ENST00000384488 135 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 DHFRP6-201ENST00000401776 268 ntBASIC-0.59□□□□□ -2.5
TFF3Q07654 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
TFF3Q07654 MTATP6P31-201ENST00000406985 692 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms